Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23p05
(708 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 27 0.23
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.40
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.53
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 25 0.70
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 24 1.6
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 2.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 6.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.7
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 26.6 bits (56), Expect = 0.23
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 199 NKNYNPILNTDFLL-HESGGIPNTPKRDNLPTN--TNIETNGKNNYNSQFPQLGSTHKSQ 369
++N N +LN D L H + I D + + N + N+YN Q + KS
Sbjct: 381 DRNQN-VLNNDLNLEHVNFQILGANVNDLIRNSRCANFDNQDNNHYNHNHNQARHSSKSD 439
Query: 370 HTNTNQQSLQSN 405
+ N NQ + Q++
Sbjct: 440 NQNNNQHNDQAH 451
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 0.40
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 437 VNCGDT*SLLPFDCKDCWFVFVCW 366
+NCG PFD ++C +F W
Sbjct: 140 LNCGLRLEKFPFDVQECPLIFESW 163
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.4 bits (53), Expect = 0.53
Identities = 20/92 (21%), Positives = 38/92 (41%)
Frame = +1
Query: 262 NTPKRDNLPTNTNIETNGKNNYNSQFPQLGSTHKSQHTNTNQQSLQSNGKRDYVSPQFTT 441
N+P DN+ +E G N+ N+ S+ + + S+ + + S +T
Sbjct: 233 NSPLEDNIKCEP-LELTGGNSGNAAGNNEDSSDSGAAASDRPPASASSNEHEAESEHTST 291
Query: 442 PKPSSGQTLIPQSTRNPNHNPSSSTRGITPLS 537
P S + P + + N + ++ TPLS
Sbjct: 292 PNFLSEAKIFPPTPGSFNFSMAALATEHTPLS 323
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 25.0 bits (52), Expect = 0.70
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 421 VSPQFTTPKPSSGQTLIPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTTGKVKDLIHF 600
V P+F + +L+P +T +P PS++T TT Q + + KD++H
Sbjct: 363 VKPEFGSIYFLGNYSLVPTTTASPTTEPSTTT-------STTISQKHIKVFVVNKDILHE 415
Query: 601 Y---DGKSKDQNAPQPIPSYSSILQGTGNNNFPTS 696
+ D + D+N P P S + ++ P S
Sbjct: 416 HNVDDNEDHDENMIIP-PKKSDMSNMQSDDGGPLS 449
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 406 GKRDYVSPQFTTPKPSSGQTLIPQSTRNPNHNPSSS 513
G DY SP++ T P + + T NP+ ++S
Sbjct: 127 GSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 162
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 286 PTNTNIETNGKNNYNSQFPQLGSTHKSQHTNTNQ 387
P + NI+ K Y + + Q+ S + ++ TN+
Sbjct: 272 PIDDNIDDEFKGTYKTLYKQMWSQNITERPTTNE 305
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 358 ASNLTVEIESYNY 320
+ N TVEIESY Y
Sbjct: 172 SQNCTVEIESYGY 184
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 262 NTPKRDNLPTNTNIETNGKNNYNSQF 339
N P +N N N K+NYN +
Sbjct: 85 NNPLSNNYNYNNNYNNYNKHNYNKLY 110
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 325 NYFYHSFRCLY*SVNYL 275
NY H++ LY ++NY+
Sbjct: 100 NYNKHNYNKLYYNINYI 116
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 292 NTNIETNGKNNYNSQFPQL 348
N N N NNYN+ + +L
Sbjct: 98 NNNYNNNYNNNYNNNYKKL 116
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 292 NTNIETNGKNNYNSQFPQL 348
N N N NNYN+ + +L
Sbjct: 98 NNNYNNNYNNNYNNNYKKL 116
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 3.7
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 LTMLCVLFFYVKPNTGREHNKNYNPILN-TDFLLHESGGIPNT 267
++ LCVL FY+ G + + +L+ FLL S +P T
Sbjct: 247 ISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPT 289
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 87 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 320 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 364 SCASNLTVEIESYNYFYHSFRCLY*SVNYL 275
S ++N NY H++ LY ++NY+
Sbjct: 320 SLSNNYNYNNNYNNYNKHNYNKLYYNINYI 349
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 277 DNLPTNTNIETNGKNNYNSQFPQL 348
+N N N N NNYN+ + +L
Sbjct: 328 NNYNNNYNNYNNYNNNYNNNYKKL 351
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 247 SGGIPNTPKRDNLPTNTN 300
S IP P N+P NTN
Sbjct: 761 SVSIPPPPSAQNVPQNTN 778
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.0
Identities = 24/95 (25%), Positives = 37/95 (38%)
Frame = +1
Query: 289 TNTNIETNGKNNYNSQFPQLGSTHKSQHTNTNQQSLQSNGKRDYVSPQFTTPKPSSGQTL 468
+N N N NN N+ G+ + + + N N G Y P G+
Sbjct: 238 SNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHY------GHHPDPGEVD 291
Query: 469 IPQSTRNPNHNPSSSTRGITPLSPTTKVQPNHQTT 573
+P T+ P PS++ G T T P+H +T
Sbjct: 292 LPPETQ-PT-PPSATLVGTT---ITHLRDPDHHST 321
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 6.6
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -1
Query: 453 TGLRCCKLWRYIISFTVRL*RLLVCICMLALVRRT*LWKLRVIIIFTI 310
+GLR ++WR + +R C + V + W L +I+ I
Sbjct: 27 SGLRWFEIWRDSLPTKMRELNATACAALYERVEWSGPWILVTLIVLAI 74
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 90 NYNNYNNNYKPLYYNINYI 108
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 323 NYNNYNNNYKPLYYNINYI 341
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 323 NYNNYNNNYKPLYYNINYI 341
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 323 NYNNYNNNYKPLYYNINYI 341
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 331 SYNYFYHSFRCLY*SVNYL 275
+YN + ++++ LY ++NY+
Sbjct: 312 NYNNYNNNYKPLYYNINYI 330
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,165
Number of Sequences: 438
Number of extensions: 5094
Number of successful extensions: 43
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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