Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23o08
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.9  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   4.3  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.3  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   7.5  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   7.5  
U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    23   10.0 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   10.0 

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 245  HRSSTYMKLNVEIQDVVRNL 304
            +R+ +Y K+N E+Q++ RN+
Sbjct: 1032 YRNESYEKINSELQELYRNI 1051


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 245  HRSSTYMKLNVEIQDVVRNL 304
            +R+ +Y K+N E+Q++ RN+
Sbjct: 1033 YRNESYEKINSELQELYRNI 1052


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 486 HRQINMKTYLIRQNGTLI 539
           HR +  K  LIR NGT +
Sbjct: 277 HRDLKTKNILIRANGTCV 294


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -2

Query: 567 VQICTYEALGSRFHFV*SGMSSYLSVGGSTKFTFPYF 457
           V I T E     F +  SG+SS+LSV     FTF  F
Sbjct: 102 VHIYTREPYCQLFTYT-SGVSSFLSVWYVVAFTFERF 137


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 488 PTDKYEDIPDQTKWNLDPNASYVHICTNETIH 583
           PTD+     D   W LD   S +   T  T H
Sbjct: 71  PTDRTGCPTDPDGWRLDYRGSSITTTTTSTCH 102


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 488 PTDKYEDIPDQTKWNLDPNASYVHICTNETIH 583
           PTD+     D   W LD   S +   T  T H
Sbjct: 71  PTDRTGCPTDPDGWRLDYRGSSITTTTTSTCH 102


>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 461 YGKVNLVLPPTDKYE 505
           Y K+  VLPP  KYE
Sbjct: 128 YYKIKAVLPPNWKYE 142


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 1   DFSFLSRRQTEPHR 42
           D+SFL   + EPHR
Sbjct: 85  DYSFLQIEKNEPHR 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,873
Number of Sequences: 2352
Number of extensions: 10395
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)