Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23m18
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical ...   193   9e-50
Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical pr...    53   2e-07
U41539-2|AAB52497.2|  244|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical pr...    28   4.2  
U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical p...    27   9.6  

>AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical
           protein C04C3.3 protein.
          Length = 352

 Score =  193 bits (470), Expect = 9e-50
 Identities = 88/128 (68%), Positives = 106/128 (82%)
 Frame = +2

Query: 176 ATSKALASKPVTVRDALNQAIDEEMERDEKVFVLGEEVAQYDGAYKVTRGLWKKYGDKRV 355
           A +   A+  +TVRDALNQA+DEE++RD++VF++GEEVAQYDGAYK+++GLWKK+GDKRV
Sbjct: 15  AGTSTRAASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRV 74

Query: 356 IDTPITEXXXXXXXXXXXXXXLKPICEFMTFNFSMQAIDHIINSAAKTFYMSAGTVPVPI 535
           +DTPITE              L+PICEFMTFNFSMQAID IINSAAKT+YMSAG VPVPI
Sbjct: 75  VDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPI 134

Query: 536 VFRGPNGS 559
           VFRGPNG+
Sbjct: 135 VFRGPNGA 142


>Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical
           protein F27D4.5 protein.
          Length = 366

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 30/107 (28%), Positives = 50/107 (46%)
 Frame = +2

Query: 191 LASKPVTVRDALNQAIDEEMERDEKVFVLGEEVAQYDGAYKVTRGLWKKYGDKRVIDTPI 370
           L    + +  ++N+A+   ME D+   + GE+VA + G ++ +  L KK+G  RV +TP+
Sbjct: 40  LEKTKMNLMQSVNEAMRIAMETDDSAVLFGEDVA-FGGVFRCSLDLQKKFGKDRVFNTPL 98

Query: 371 TEXXXXXXXXXXXXXXLKPICEFMTFNFSMQAIDHIINSAAKTFYMS 511
            E                 I E    ++   A D ++N AAK  Y S
Sbjct: 99  CEQGIAGFGIGVAAAGATAIAEIQFGDYIFPAYDQLVNEAAKFRYRS 145


>U41539-2|AAB52497.2|  244|Caenorhabditis elegans Hypothetical
           protein K05G3.2 protein.
          Length = 244

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 458 MQAIDHIINSAAKTFYMSAGTVPVPIVFRGPNGSC 562
           MQA D+      +TFY  AG V +      P G+C
Sbjct: 1   MQAFDNFNGQNQRTFYYQAGNVQISAKINLPEGTC 35


>Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical
           protein AH10.3 protein.
          Length = 282

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +2

Query: 122 KSSPAVLGMLTRLSRRSFATSKALASKPVTVRDALNQAIDEEMERDEKV 268
           K S +++  L  L  R+ ATS    ++P T  D L++   EEM+R E +
Sbjct: 22  KRSSSLIASL--LGSRNGATSSKTINEPTTTEDELDEESMEEMKRRELI 68


>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
           protein K09H11.3 protein.
          Length = 1085

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -1

Query: 471 SIACIEKLKVMNSQIGLSPAKAAPTAIPANPASVMGVSITLLSPYFFHRPLVTL*APSY* 292
           S+     L    S+  LS +KA  + +   P+ V   S +L+SP   H  +    APS  
Sbjct: 718 SVTRTPSLSRRRSRAHLSYSKATESPLD-KPSEVRRESSSLMSPLLKHVTMTNNSAPSQV 776

Query: 291 ATSSPK 274
            TSSP+
Sbjct: 777 ITSSPR 782


>U50312-1|AAA92318.1|  285|Caenorhabditis elegans Hypothetical
           protein B0222.1 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = -3

Query: 559 APIRSSEYYWHWYCAS*HIEGLGG*VYYMINSLHREVKGHEFTNRLEPCKSSSNSYTGES 380
           +P+    Y+++W     H         Y I    +E++   F+N  +P   +    + ES
Sbjct: 109 SPMIYGNYHYYWGGHYVHTPERPHMCEYQITDDDQELRNVTFSNGTKPTTLTFGCTSSES 168

Query: 379 CLCDGCVDN-SFITIFL 332
           C    C  N S++TI L
Sbjct: 169 CCGMECCSNTSWVTIIL 185


>U58758-12|AAB93432.1|  392|Caenorhabditis elegans Hypothetical
           protein ZK1127.10 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 414 AKAAPTAIPANPASVMGVSITLLSPYFFHRPL 319
           A    TA  ANP  V+ V  T +SPY F RP+
Sbjct: 160 AAVVQTAKKANPEIVVVVDNTFMSPY-FQRPI 190


>Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical
           protein K03H1.13 protein.
          Length = 395

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 212 VRDALNQAIDEEMERDEKVFVLGEEVAQYDGAYKVTRGLWKKYGDKRVIDTPITE 376
           ++  L +   EEM +D  +  + +E+   D  Y +T    KK+ +  ++ +PITE
Sbjct: 177 LKRVLQKPTIEEMRKDGAI--MEDEMVLTDSCYFMTWKFCKKFMENPLLRSPITE 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,751,921
Number of Sequences: 27780
Number of extensions: 246196
Number of successful extensions: 696
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)