Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23m15
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 34 0.001
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 34 0.001
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 5.5
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 5.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 5.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.7
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 9.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.7
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 34.3 bits (75), Expect = 0.001
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 213 DFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALA 392
DF+ GG+A + P++ VK LQ+Q + + + RY+G+ I + G L+
Sbjct: 13 DFLAGGVAAAISKTTVAPIERVKLLLQVQ-HISKQISEEQRYKGMIDCFVRIPKEQGFLS 71
Query: 393 LQKG 404
+G
Sbjct: 72 YWRG 75
Score = 31.1 bits (67), Expect = 0.009
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 225 GGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQKG 404
GG AG + P+D +TRL K + G+ + L I +ADG L +G
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAAD---VGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Query: 405 LAPAMLLGFTMNSVRLGMYHVA 470
++ + G Y A
Sbjct: 179 FGVSVQGIIIYRAAYFGFYDTA 200
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 34.3 bits (75), Expect = 0.001
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 213 DFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALA 392
DF+ GG+A + P++ VK LQ+Q + + + RY+G+ I + G L+
Sbjct: 13 DFLAGGVAAAISKTTVAPIERVKLLLQVQ-HISKQISEEQRYKGMIDCFVRIPKEQGFLS 71
Query: 393 LQKG 404
+G
Sbjct: 72 YWRG 75
Score = 31.1 bits (67), Expect = 0.009
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 225 GGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQKG 404
GG AG + P+D +TRL K + G+ + L I +ADG L +G
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAAD---VGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Query: 405 LAPAMLLGFTMNSVRLGMYHVA 470
++ + G Y A
Sbjct: 179 FGVSVQGIIIYRAAYFGFYDTA 200
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 251 NNNKSNGRSENSPAATGRIESEDR 322
N+NK NG +N G +++++
Sbjct: 466 NDNKQNGNRQNDNKQNGNRQNDNK 489
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 251 NNNKSNGRSENSPAATGRIESEDR 322
N+NK NG +N G +++++
Sbjct: 501 NDNKQNGNRQNDNKRNGNRQNDNQ 524
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 491 DKRRRNKCQ 517
DKR+RN+CQ
Sbjct: 155 DKRQRNRCQ 163
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 491 DKRRRNKCQ 517
DKR+RN+CQ
Sbjct: 155 DKRQRNRCQ 163
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 245 SHNNNKSNGRSENSPAATGRIESEDRTVHQI*GDLPC 355
S+NNN +N + N+ A + + GD+ C
Sbjct: 238 SNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDMFC 274
Score = 21.0 bits (42), Expect = 9.7
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +2
Query: 239 SRSHNNNKSNGRSEN 283
+ ++NNN +NG ++N
Sbjct: 243 NNNNNNNNNNGANDN 257
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 101 LSGVYLKVIECFASYILAVNSLR 169
L V+ K + C +I A+N R
Sbjct: 320 LPAVFAKTVSCIDPWIYAINHPR 342
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 330 TRYRGIFHALYVI 368
+R+ GI HA YVI
Sbjct: 249 SRHYGILHATYVI 261
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 101 LSGVYLKVIECFASYILAVNSLR 169
L V+ K + C +I A+N R
Sbjct: 320 LPAVFAKTVSCIDPWIYAINHPR 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,516
Number of Sequences: 438
Number of extensions: 3878
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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