Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23m06
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain cont...    30   6.8  
AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein pr...    30   6.8  
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.     30   6.8  

>BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain
            containing 136 protein.
          Length = 1154

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +3

Query: 285  ANDPELEGKWSIGSVRTNVREDRRGILSEARRQCGITFEIEGLDQEQDALQNDDSNQFTE 464
            A+  +L+G       +  + E+++ +  EA+ QCG     E  D E +A   +D  +  E
Sbjct: 1025 ASQRKLDGLAKEEEKKEEMEEEKKEVKEEAKEQCGDELVAEPADPE-EAKSTEDQEENEE 1083

Query: 465  VIYVEEKRNKS 497
                EEK   S
Sbjct: 1084 DKEEEEKEEDS 1094


>AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein
            protein.
          Length = 1033

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +3

Query: 285  ANDPELEGKWSIGSVRTNVREDRRGILSEARRQCGITFEIEGLDQEQDALQNDDSNQFTE 464
            A+  +L+G       +  + E+++ +  EA+ QCG     E  D E +A   +D  +  E
Sbjct: 901  ASQRKLDGLAKEEEKKEEMEEEKKEVKEEAKEQCGDELVAEPADPE-EAKSTEDQEENEE 959

Query: 465  VIYVEEKRNKS 497
                EEK   S
Sbjct: 960  DKEEEEKEEDS 970


>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
          Length = 1270

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +3

Query: 285  ANDPELEGKWSIGSVRTNVREDRRGILSEARRQCGITFEIEGLDQEQDALQNDDSNQFTE 464
            A+  +L+G       +  + E+++ +  EA+ QCG     E  D E +A   +D  +  E
Sbjct: 1141 ASQRKLDGLAKEEEKKEEMEEEKKEVKEEAKEQCGDELVAEPADPE-EAKSTEDQEENEE 1199

Query: 465  VIYVEEKRNKS 497
                EEK   S
Sbjct: 1200 DKEEEEKEEDS 1210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,428,545
Number of Sequences: 237096
Number of extensions: 1382626
Number of successful extensions: 3163
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3163
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)