Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23m02
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 75 8e-15
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 50 4e-07
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 38 0.001
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 36 0.004
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 33 0.041
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 32 0.071
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 31 0.12
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 1.2
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 26 4.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 4.7
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 26 4.7
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 25 8.1
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 8.1
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 75.4 bits (177), Expect = 8e-15
Identities = 42/115 (36%), Positives = 62/115 (53%)
Frame = +2
Query: 368 EMDKHPFFMKSTPENGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFNFKHKNYRLA 547
E++K PFFM+S + G+ S L LK E P E+A N++E GN F K Y+ A
Sbjct: 24 ELNKVPFFMQSLEDVGDESENNVQLDALKALAYEGEPHEVAQNFREHGNECFASKRYKDA 83
Query: 548 ILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSALGDXEKALSFSSNXTKA 712
YT+ + Q+C + +I + Y+NRAA + +N+R L D + L S KA
Sbjct: 84 EEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYRQVLNDCAQVLQRDSTHAKA 138
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 49.6 bits (113), Expect = 4e-07
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +2
Query: 449 LKFDPEENTP------VELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASL 610
LK DP+ T V N K GN F+ NY+ A Y+E ++ DN E A L
Sbjct: 204 LKLDPDCTTAKTLFKQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKL 263
Query: 611 YNNRAAAHWHLKNFRSALGDXEKALSFSSNXTK 709
Y NRA LK AL D + AL+ S+ K
Sbjct: 264 YMNRATVLLRLKRPEEALSDSDNALAIDSSYLK 296
Score = 46.8 bits (106), Expect = 3e-06
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +2
Query: 467 ENTPVELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLK 646
+ P ELA K GN +K K Y AI YTE I D+A A Y+NRAA + +
Sbjct: 16 QQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSA--LAIYYSNRAATYMQIG 73
Query: 647 NFRSALGDXEKA 682
F AL D +++
Sbjct: 74 EFELALCDAKQS 85
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = +2
Query: 482 ELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSA 661
+LA+ K GN + K Y AI YT+ I C + I ++NRAA + + +F
Sbjct: 149 KLAAELKTLGNKAYGQKEYANAIDYYTQAIT--CSHDPI---FFSNRAACYAAIGDFEQV 203
Query: 662 LGDXEKALSFSSNXTKA 712
+ D +ALS S+ KA
Sbjct: 204 IKDTSEALSLDSSYVKA 220
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 36.3 bits (80), Expect = 0.004
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +2
Query: 485 LASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSAL 664
+A K GN F K+Y+ AI +T+ I E N LY+NR+A + K++ AL
Sbjct: 1 MAEELKAKGNAAFSKKDYKTAIDYFTQAIGLD----ERNHILYSNRSACYASEKDYADAL 56
Query: 665 GDXEKALSFSSNXTK 709
D K + K
Sbjct: 57 KDATKCTELKPDWAK 71
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 33.1 bits (72), Expect = 0.041
Identities = 28/93 (30%), Positives = 44/93 (47%)
Frame = +2
Query: 434 EGLANLKFDPEENTPVELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLY 613
E L ++ D + E A K +GN K+Y+ A+ YT+ I+ D + Y
Sbjct: 65 EKLHPVEEDSTAHVNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIE--IDPT--SPVYY 120
Query: 614 NNRAAAHWHLKNFRSALGDXEKALSFSSNXTKA 712
+NRAAA+ L F +A+ D LS + +A
Sbjct: 121 SNRAAAYNQLGQFENAVEDALTCLSLDPHHARA 153
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 32.3 bits (70), Expect = 0.071
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +2
Query: 488 ASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSALG 667
A K + N K + AI YT+ I+ D+ NA LY+NR+ AH +++ A+
Sbjct: 5 ALELKNEANKFLKEGHIVQAIDLYTKAIE--LDST--NAILYSNRSLAHLKSEDYGLAIN 60
Query: 668 DXEKALSFSSNXTKA 712
D KA+ KA
Sbjct: 61 DASKAIECDPEYAKA 75
Score = 28.7 bits (61), Expect = 0.87
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 518 NFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSALGDXEKALSFSS 697
+ K ++Y LAI ++ I+ CD A Y RA AH + + A+GD KAL+ +
Sbjct: 49 HLKSEDYGLAINDASKAIE--CDPEYAKA--YFRRATAHIAIFQPKEAVGDFRKALALAP 104
Query: 698 NXTKA 712
+ A
Sbjct: 105 SDPAA 109
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 254 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEM 373
EEE + + +KE D F+ L +R TE W ++ +E+ +
Sbjct: 696 EEEMIIRMAEEEKEYDRFVSELNQRHETEEWNQEAFEKRL 735
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 209 IMAEANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYT 337
I+ +A KS +K P T + L C + +++ D + EK+ +T
Sbjct: 28 ILKDAKKSCLKDPTTSMKELVACSEKTQQVFDDLKRTEKKFHT 70
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 4.7
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = +2
Query: 227 KSDVKSPMTEEERLELCQKLDKE----LDDFIDSLEKRRYTEGWPEDRWEEEM-DKHPF- 388
KS+ +P +EE+ ++CQ D+ ++ L K Y+ E ++ +M +K+P
Sbjct: 73 KSNPTNPKSEEDPSQICQSFDESNIITPSKYLFPLSK-DYSPN--EGLFQTDMNEKNPHD 129
Query: 389 FMKSTPENGELSPLAEGLANLKF-DPEENTPVELASNYKE--DGNFNFKHKNYRLAILGY 559
T LS +GL K + E+ P+ Y E +G F+ + +L +LG
Sbjct: 130 LWNPTVPMAYLSRSLQGLTISKINETEQKFPLSSVHAYVEIGEGMFSMEIVTEQLRLLGA 189
Query: 560 T--EGIKQRCDNAEINASLYN 616
T ++ +N +A LY+
Sbjct: 190 TVHASLQMTEENPVSHAVLYD 210
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 395 KSTPENGELSPLAEGLANLKFDPEENTPVELASNYKEDGNF 517
++ PE +LS + G++ L + E TP+ S K+ F
Sbjct: 187 RTAPEFNQLSTVMSGISILGWVTVEPTPLSFMSEMKDSSQF 227
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 221 ANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPED 355
A+ SD+ + +E+ + C D E+D+F +L+ + Y EG D
Sbjct: 1745 ASDSDISNSTSEDINKDECVSKDIEVDNFALNLQSQSY-EGDSND 1788
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 25.4 bits (53), Expect = 8.1
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 182 KLLYLKSN*IMAEANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRW 361
K Y+ + + E + + + +EE+ + + L+KELD + S +K + E R+
Sbjct: 16 KYSYVNYDKLKKEIKRRNDQGGWSEEDESDFVELLEKELDK-VYSFQKNKSAEVMERIRF 74
Query: 362 -EEEMDK 379
EE+ D+
Sbjct: 75 CEEQTDE 81
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 432 QRVSQISSLIQKKTHLLN*LVITKRMEISISNTRIIDLQY 551
+ + Q+++L+ ++ + L K EI N+R+ DL+Y
Sbjct: 1548 ENIEQLNNLLAEEKSAVKRLSTEKESEILQFNSRLADLEY 1587
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,609,982
Number of Sequences: 5004
Number of extensions: 54740
Number of successful extensions: 185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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