Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23m02
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 44 8e-05
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 42 6e-04
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 42 6e-04
M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical pr... 31 0.82
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006714-11|AAN65282.3| 306|Caenorhabditis elegans F-box a prot... 30 1.4
Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 29 2.5
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 29 2.5
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 29 3.3
U80032-2|AAM15555.1| 643|Caenorhabditis elegans Osmotic stress ... 29 4.4
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY360470-1|AAR12229.1| 643|Caenorhabditis elegans osmotic stres... 29 4.4
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 29 4.4
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 29 4.4
AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical ... 28 7.6
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 115 bits (276), Expect = 4e-26
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 6/163 (3%)
Frame = +2
Query: 239 KSPMTEEERLELCQKLDKELDDFIDSL-----EKRRYTEGWPEDRWEEEMDKHPFFMKST 403
K TE ER L +KLD +LD F++ + +K+ + + D W +E+D+HP FM
Sbjct: 6 KKKFTESERAALAKKLDDDLDQFMEEMAARKSDKKEERKPFDFDDWCKEIDQHPAFMTEM 65
Query: 404 PENGELSPLAEGLANLKFDPEENTPVEL-ASNYKEDGNFNFKHKNYRLAILGYTEGIKQR 580
P +G+ E L ++K+D E++ ++ A ++KE+GN +FK K YR A Y+ GIK+
Sbjct: 66 PTDGKYQDTIEALQSMKYDKEDDEDKQMNAEHHKEEGNKHFKFKKYRWATDCYSNGIKEN 125
Query: 581 CDNAEINASLYNNRAAAHWHLKNFRSALGDXEKALSFSSNXTK 709
+ ++NA LY NRAAA HL N RSA+ D F K
Sbjct: 126 SPDRKLNAVLYFNRAAAQKHLGNLRSAIKDCSMGRKFDPTHLK 168
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/76 (36%), Positives = 37/76 (48%)
Frame = +2
Query: 482 ELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSA 661
ELA K GN FK +Y A+ Y E +K+ + NA LY+NRAA L F+ A
Sbjct: 138 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE----NAILYSNRAACLTKLMEFQRA 193
Query: 662 LGDXEKALSFSSNXTK 709
L D + + S K
Sbjct: 194 LDDCDTCIRLDSKFIK 209
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 500 KEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSALGDXEK 679
K+ GN +K K++ A + Y + I+ D + N + YNN+AA ++ K F + EK
Sbjct: 9 KDLGNAAYKQKDFEKAHVHYDKAIE--LDPS--NITFYNNKAAVYFEEKKFAECVQFCEK 64
Query: 680 AL 685
A+
Sbjct: 65 AV 66
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 479 VELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAE-INASLYNNRAAAHWHLKNFR 655
V+ A +++GN K ++Y A YTE ++ D + + LY NRA A +F
Sbjct: 5 VQTAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFE 64
Query: 656 SALGDXEKALSFSSNXTKA 712
A D KAL F KA
Sbjct: 65 GAQSDCTKALEFDGADVKA 83
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein.
Length = 961
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 479 VELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAE-INASLYNNRAAAHWHLKNFR 655
V+ A +++GN K ++Y A YTE ++ D + + LY NRA A +F
Sbjct: 5 VQTAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFE 64
Query: 656 SALGDXEKALSFSSNXTKA 712
A D KAL F KA
Sbjct: 65 GAQSDCTKALEFDGADVKA 83
>M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical
protein ZK370.8 protein.
Length = 569
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 509 GNFNFKHKNYRLAILGYTEGIKQRCDNA--EINASLYNNRAAAHWHLKNFR-SALGDXEK 679
GN FK K Y A+ +T+G+++ N+ +I A LY NRAA + + L D
Sbjct: 51 GNLKFKEKQYDSALEAFTKGVEKAGPNSSDQIVAMLYQNRAACREKVGHSPFDILNDCMA 110
Query: 680 ALSFSSNXTKA 712
AL TKA
Sbjct: 111 ALKVDKKYTKA 121
>Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical
protein F17A2.1 protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 242 SPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWP-EDRWEEEMDK 379
S +EEE ++ + D+E+ +DSLEK++ T+G P E ++MDK
Sbjct: 194 SETSEEEDVDSDGECDEEVQAVLDSLEKKKITDGNPIEVEQHKKMDK 240
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +2
Query: 254 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 433
+ E+LEL + + K D + +++ +GW ++ W E+ K K T EL+
Sbjct: 1400 QAEKLELEKIIQKLEVDIAEKEQEKTDNDGWNDEDWREDDQKETESEKLTQLRNELTARI 1459
Query: 434 EGLANLKFDPEENTPVELA 490
E L + K + + +L+
Sbjct: 1460 EQLESQKSNEQAQMSEKLS 1478
>Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical
protein M28.7 protein.
Length = 682
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 CQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKS-TPENGELS 424
CQ+L ++LDD + +EK + E + ++ E++DK + + +PE +LS
Sbjct: 50 CQELHRQLDDHRNRIEKAKTDETYKKENALEQLDKLKQRLTALSPEKEQLS 100
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = +2
Query: 392 MKSTPENGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFNFKHKNYRLAILGYTEGI 571
M +T + ++ + E + ++ E+ E A K++ N FK + Y +A Y+ I
Sbjct: 1 MAATITDDIVATVLESIEEKSYEDEK----EKAGMIKDEANQFFKDQVYDVAADLYSVAI 56
Query: 572 KQRCDNAEINASLYNNRAAAHWHLKNFRSALGDXEKALSFSSNXTK 709
+ A LY NRA A+ + + SAL D + A++ + K
Sbjct: 57 E-----IHPTAVLYGNRAQAYLKKELYGSALEDADNAIAIDPSYVK 97
>AC006714-11|AAN65282.3| 306|Caenorhabditis elegans F-box a protein
protein 61 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 446 NLKFDPEENTPVELASNYKEDGNFNFKHKNYRLAILGYTEGIK 574
N+ FD + PVE+A + G F+ + Y I YT G+K
Sbjct: 250 NITFDKSTSNPVEIAKVFNCTGENEFRTEYYSNDINRYTIGLK 292
>Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical
protein R06C7.5b protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 284 LDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANL 451
L + D ID ++ R WP R EE KH M G+L P A G+ +L
Sbjct: 50 LKQVTQDAIDEMKSNRDVFDWPFIRSEERKLKHD-VMAHNHAFGKLCPTAAGIIHL 104
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 284 LDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANL 451
L + D ID ++ R WP R EE KH M G+L P A G+ +L
Sbjct: 50 LKQVTQDAIDEMKSNRDVFDWPFIRSEERKLKHD-VMAHNHAFGKLCPTAAGIIHL 104
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/113 (24%), Positives = 48/113 (42%)
Frame = +2
Query: 218 EANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMK 397
E D+KS E E+ D +D+ I+ E +Y + +W +E+D P M
Sbjct: 406 EEPMDDLKSEAGETTASEMM--FDDGIDEDINMAEVEKYRKERENAQWPDEVDT-PMDMP 462
Query: 398 STPENGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFNFKHKNYRLAILG 556
+ + L + +DP+EN P++ A + + N+ KN I G
Sbjct: 463 ARIAFQKYRGL-KSFRTSTWDPKENLPLDYARIF-QFANYRNTKKNVMSKIGG 513
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 212 MAEANKSDVKSPMTEEERLELCQKLDKELDDFIDSL 319
MAEA K+D S ++E ++L++ Q L K D + +L
Sbjct: 539 MAEAYKNDSSSEISELKKLKVLQDLSKPFGDAVGAL 574
>Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical
protein F35E2.6 protein.
Length = 698
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = +2
Query: 473 TPVELASNYKEDGNFNFKHKNYRLAILGYTEGIKQ---RCDNAEINASLYNN 619
TP+E+ FK Y LA Y E +K+ RC + YNN
Sbjct: 606 TPIEVEKRLGHVAGMPFKQATYELARKRYAELVKECNGRCGLVDYKLEFYNN 657
>Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical
protein F52H3.5 protein.
Length = 179
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 599 NASLYNNRAAAHWHLKNFRSALGDXEKALSFSSNXTK 709
N S YNNRA A+ AL D +ALS + TK
Sbjct: 76 NPSAYNNRAQAYRLQNKPEKALDDLNEALSLAGPKTK 112
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 482 ELASNYKEDGNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSA 661
++A KE GN FK K Y A+ Y++ ++ D +++NRA A + A
Sbjct: 6 KIAQRLKEQGNEAFKKKKYHKAMTIYSKSLEHWPD-----PIVFSNRAQAGLNADLPLLA 60
Query: 662 LGDXEKALSFSSNXTKA 712
D AL+ S KA
Sbjct: 61 QIDCTAALNLDSTAAKA 77
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +2
Query: 377 KHPFFMKSTPENGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFNFKHKNYRLAILG 556
+ P F+K+ + L+ L++ F PV+ N K D F ++ L LG
Sbjct: 280 RFPHFIKTAHLHRLLASFEVSLSSFHFPAN---PVKEVRNAKADHGFTLQNLKNELTYLG 336
Query: 557 YTEGIKQRCDNAEI 598
TE D AEI
Sbjct: 337 LTETFPDITDYAEI 350
>U80032-2|AAM15555.1| 643|Caenorhabditis elegans Osmotic stress
resistant protein 1 protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +2
Query: 278 QKLDKELDDFIDS-LEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANLK 454
Q+ D++ DD D + +RR ++G P+ E + +KS+P EL AE + L
Sbjct: 247 QEEDEDDDDLEDEDVPRRRSSDGEPQSEAEHQRRDLARRLKSSPRLKELLQNAEVQSLLS 306
Query: 455 FDPEENTPVE----LASNYKEDGNF 517
+ ++P+ LA N +++ F
Sbjct: 307 YQRMRDSPLSKRRPLAMNDEDESAF 331
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 445 CETLCQWRKLTIFRS*LHKKWMFV 374
CET W ++F+ +HK+W FV
Sbjct: 120 CETNRLWHTNSMFKKPMHKRWTFV 143
>AY360470-1|AAR12229.1| 643|Caenorhabditis elegans osmotic stress
resistance protein protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +2
Query: 278 QKLDKELDDFIDS-LEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANLK 454
Q+ D++ DD D + +RR ++G P+ E + +KS+P EL AE + L
Sbjct: 247 QEEDEDDDDLEDEDVPRRRSSDGEPQSEAEHQRRDLARRLKSSPRLKELLQNAEVQSLLS 306
Query: 455 FDPEENTPVE----LASNYKEDGNF 517
+ ++P+ LA N +++ F
Sbjct: 307 YQRMRDSPLSKRRPLAMNDEDESAF 331
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 445 CETLCQWRKLTIFRS*LHKKWMFV 374
CET W ++F+ +HK+W FV
Sbjct: 291 CETNRLWHTNSMFKKPMHKRWTFV 314
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 445 CETLCQWRKLTIFRS*LHKKWMFV 374
CET W ++F+ +HK+W FV
Sbjct: 30 CETNRLWHTNSMFKKPMHKRWTFV 53
>AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical
protein Y37B11A.1 protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 509 GNFNFKHKNYRLAILGYTEGIKQRCDNAEINASLYNNRAAAHWHLKNFRSALG 667
GN N + R+A++ Y+ Q + + N+ LY N + +KN RS G
Sbjct: 278 GNINIHPEAVRVALITYSG---QAFVHFKFNSFLYGNNTSVQGFVKNIRSIKG 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,253,439
Number of Sequences: 27780
Number of extensions: 301756
Number of successful extensions: 1006
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -