Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23m02
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    26   0.41 
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   1.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.6  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   5.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.6  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 102 FFVENYFIKRTCSLMFHKHNP 40
           F V + FIKR CS +F K  P
Sbjct: 92  FVVPHQFIKRICSALFGKIKP 112


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 449 LKFDPEENTPVELASNYKEDGNFNFKHKNYRLAILGY 559
           L F     TP  + + Y  D +  F   NYRL ILG+
Sbjct: 2   LAFQLGSGTP--MGAKYLMDSDVIFVTINYRLGILGF 36


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 479 VELASNYKEDGNFNFKHKNYRLAILGY 559
           + + + Y  D +  F   NYRL ILG+
Sbjct: 139 IPMGAKYLMDSDVIFVTINYRLGILGF 165


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 479 VELASNYKEDGNFNFKHKNYRLAILGY 559
           + + + Y  D +  F   NYRL ILG+
Sbjct: 139 IPMGAKYLMDSDVIFVTINYRLGILGF 165


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +2

Query: 278 QKLDKELDDFIDS-LEKRRYTEGWP-EDRWEEEMDKHPFFMKSTPENGELSPLAEGLANL 451
           +KL  E + F++    ++RY+     E +  +   ++  + +++ E        E     
Sbjct: 20  EKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERERSKEP 79

Query: 452 KFDPEENTPVELASNYKEDGNFNFKHKNY 538
           K     N+   L++NY  + N+N  + NY
Sbjct: 80  KIISNNNS---LSNNYNYNNNYNNYNNNY 105


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 651 SDLHSETVKKRY 686
           SD+HS+ ++K+Y
Sbjct: 331 SDMHSDNIEKKY 342


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 651 SDLHSETVKKRY 686
           SD+HS+ ++K+Y
Sbjct: 331 SDMHSDNIEKKY 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,847
Number of Sequences: 438
Number of extensions: 3884
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)