Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23k17
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 29 0.041
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 27 0.16
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 27 0.16
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 27 0.16
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 26 0.29
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 26 0.29
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 3.5
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 3.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 4.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 8.2
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 29.1 bits (62), Expect = 0.041
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 381 ESYHYYMWNEFFKHIDIEPSNAHVLDGNASDLVLE-CQR 494
ES Y W HID +P + + A +VLE CQR
Sbjct: 183 ESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQR 221
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 27.1 bits (57), Expect = 0.16
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMP 272
KV+ +L +N P LW+S+ Y P
Sbjct: 89 KVIKFLVENKPELWDSLANKYDP 111
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 27.1 bits (57), Expect = 0.16
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMP 272
KV+ +L +N P LW+S+ Y P
Sbjct: 89 KVIKFLVENKPELWDSLANKYDP 111
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 27.1 bits (57), Expect = 0.16
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMP 272
KV+ +L +N P LW+S+ Y P
Sbjct: 89 KVIKFLVENKPELWDSLANKYDP 111
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 26.2 bits (55), Expect = 0.29
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMPRG 266
KVV +L DN P +W + Y P G
Sbjct: 88 KVVQFLIDNKPEIWVLLEAKYDPTG 112
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 26.2 bits (55), Expect = 0.29
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMPRG 266
KVV +L DN P +W + Y P G
Sbjct: 88 KVVQFLIDNKPEIWVLLEAKYDPTG 112
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMPRG 266
KVV YLK P W ++ Y G
Sbjct: 85 KVVNYLKTKRPKDWERLSAKYDSTG 109
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 340 KVVTYLKDNFPSLWNSINRLYMPRG 266
KVV YLK P W ++ Y G
Sbjct: 85 KVVNYLKTKRPKDWERLSAKYDSTG 109
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -2
Query: 541 PMNKCTPPASCMSFSKR*HSSTKSDALPSSTCALLG 434
P +C PP S H + + P +T LLG
Sbjct: 1697 PNRRCPPPPRMGSAEGLSHRGMEDEICPYATFHLLG 1732
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 281 VHAEGRPTGGQAQHEVSSRTRSELRDPLENESGGPVGNDAG 159
V+ G Q V SR L PL+ E G P G G
Sbjct: 366 VYRPGENPVTQRLPAVLSRIGIILASPLKREGGPPTGATTG 406
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -2
Query: 259 PVGRPSTKCLPGPGANCVIRWRTNLAAQSAT 167
P+G+ +KC C + +TNL+ S++
Sbjct: 703 PIGKALSKCHNRNVTTCNMFRKTNLSGDSSS 733
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,262
Number of Sequences: 438
Number of extensions: 4086
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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