Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23k02
(225 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 0.61
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 2.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 2.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 2.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 2.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 2.5
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 21 2.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 2.5
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 21 2.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 7.5
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 19 9.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 19 9.9
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 0.61
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 62 NYVSDFFFNKCVRVCNNYLSPVFSPIPV 145
NY +D +NK + NY+ + P+PV
Sbjct: 95 NYNNDNNYNKKLYYNINYIEQIPVPVPV 122
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 2.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 62 NYVSDFFFNKCVRVCNNYLSPVFSPIPV 145
NY ++ +NK + NY+ + P+PV
Sbjct: 95 NYNNNNNYNKKLYYNINYIEQIPVPVPV 122
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 17 PEMIKLLTSPVT*SFNYVSDFF---FNKCVRVCNNYLSPVFSPIPVF 148
P++I L++ + NY ++ +NK + NY+ + P+PV+
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 17 PEMIKLLTSPVT*SFNYVSDFF---FNKCVRVCNNYLSPVFSPIPVF 148
P++I L++ + NY ++ +NK + NY+ + P+PV+
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 17 PEMIKLLTSPVT*SFNYVSDFF---FNKCVRVCNNYLSPVFSPIPVF 148
P++I L++ + NY ++ +NK + NY+ + P+PV+
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 17 PEMIKLLTSPVT*SFNYVSDFF---FNKCVRVCNNYLSPVFSPIPVF 148
P++I L++ + NY ++ +NK + NY+ + P+PV+
Sbjct: 79 PKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.6 bits (41), Expect = 2.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 55 LSYWGGQ*LNHFRYW 11
LSYW G N RY+
Sbjct: 70 LSYWRGNLANVIRYF 84
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 2.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 62 NYVSDFFFNKCVRVCNNYLSPVFSPIPV 145
NY ++ +NK + NY+ + P+PV
Sbjct: 333 NYNNNNNYNKKLYYNINYIEQIPVPVPV 360
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.6 bits (41), Expect = 2.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 55 LSYWGGQ*LNHFRYW 11
LSYW G N RY+
Sbjct: 70 LSYWRGNLANVIRYF 84
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 117 YRQSFPRYQFS 149
Y+QS P YQ++
Sbjct: 448 YQQSLPVYQYN 458
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 197 FNVTKKNVNYKFMISA 150
FNV +N N+ IS+
Sbjct: 70 FNVVDENANFNEKISS 85
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +2
Query: 101 VCNNYLSPVFSPIPVF 148
VC+NYL + P++
Sbjct: 934 VCSNYLREISDGEPLY 949
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,230
Number of Sequences: 438
Number of extensions: 1252
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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