Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23k01
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    55   3e-08
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    30   0.85 
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    28   4.5  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   4.5  
U52003-7|AAM97989.1|  555|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = +3

Query: 126 EAVFSELQRQFECCGNTGAINYGQFT-LPESCCVKKSILSTFAGNNCTVDAANPGCGPKI 302
           E+ + +  + FECCG T + ++  FT +P+SCC+++  +   A  N  +    PGC   +
Sbjct: 132 ESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL--FEPGCIHSV 187

Query: 303 GELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 410
            +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 188 EQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 132 VFSELQRQFECCGNTGAINYGQF 200
           +   +QR++ CCG  GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 144 LQRQFECCGNTGAINYGQF--TLPESCCVK 227
           LQ  F CCGN G  ++  F   +P SC ++
Sbjct: 200 LQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +3

Query: 6   VQVVISVLLFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 170
           +++  +V LF   E IK  +   +    + R   +++ A +  F  +Q +FECCG
Sbjct: 99  LELAAAVTLFHKQEHIKHYVESSMYDTIRNRY--SSETAFKDAFDTVQEKFECCG 151


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 409 MELARHSANRAPTTSTQATPR 347
           M ++RH + R+ TT+T ATPR
Sbjct: 1   MTVSRHYSRRSTTTTTTATPR 21


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 409 MELARHSANRAPTTSTQATPR 347
           M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269


>U52003-7|AAM97989.1|  555|Caenorhabditis elegans Hypothetical
           protein ZK381.5a protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 102 DANADEAAEAVFSELQRQFECCGNTGAINYGQFTLPESCCVKK 230
           D NA+EA      E  R+ EC G +G + Y  F      C K+
Sbjct: 114 DLNAEEADTLRMFERTRKTECLG-SGVVQYAPFDTKCEKCPKR 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,388,982
Number of Sequences: 27780
Number of extensions: 191079
Number of successful extensions: 570
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)