Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23j20
(429 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.21
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 4.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 4.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 4.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 4.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.4
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 5.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 5.8
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 5.8
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 5.8
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 7.7
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.8 bits (54), Expect = 0.21
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 78 LPASEEGFQPMPSV--TIRPADDAHLPTANTCISRLYIPLYSSRHVL 212
L S +GF+ + S IR D H+P A+ S +P Y S V+
Sbjct: 402 LKGSPDGFESVTSQYKNIREDDARHIPHASVTDSENTVPRYLSPDVI 448
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 160 LAVGRCASSAGRI 122
+A+GRCA GR+
Sbjct: 4 VALGRCAGGGGRL 16
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 160 LAVGRCASSAGRI 122
+A+GRCA GR+
Sbjct: 4 VALGRCAGGGGRL 16
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 160 LAVGRCASSAGRI 122
+A+GRCA GR+
Sbjct: 4 VALGRCAGGGGRL 16
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 160 LAVGRCASSAGRI 122
+A+GRCA GR+
Sbjct: 4 VALGRCAGGGGRL 16
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 4.4
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 293 CYNPSHGRLPMCYLCMT**NRSYVL 367
C++ RL CY+C + + +VL
Sbjct: 1057 CFDSDRERLYDCYVCYSPNDEDFVL 1081
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 79 CLLLKKVSNQCHQLLYDQLTMRISPLLTHAFRGCTYH 189
CLL++ V N+ Y I L H + YH
Sbjct: 16 CLLVQAVPNKVADKTYVTRQKNIYELFWHVDQPTVYH 52
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 79 CLLLKKVSNQCHQLLYDQLTMRISPLLTHAFRGCTYH 189
CLL++ V N+ Y I L H + YH
Sbjct: 16 CLLVQAVPNKVADKTYVTRQKNIYELFWHVDQPTVYH 52
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 5.8
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 69 SPALPAS-EEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLL 230
S +P S E P R + HL ++ +P+Y S H L H +L
Sbjct: 28 SSGIPHSAESSASNSPDHYERFSPSTHLMDLSSPPEHRDLPIYQSHHHLHHHQVL 82
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.0 bits (42), Expect = 5.8
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2
Query: 359 RTYFIMSYINSTSAVF 312
R YF+M Y+N ++
Sbjct: 59 RLYFVMEYVNGGDLMY 74
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 20.6 bits (41), Expect = 7.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 149 EMRIVSWSYSN*WHWLETFFRSRQGWRSSPKIY*ILSF 36
+ RIV+ + +WL F+ S W K Y + F
Sbjct: 150 DARIVNGTRQPPNNWLSVFWGSAWQWNEERKQYYLHQF 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,870
Number of Sequences: 438
Number of extensions: 2542
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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