Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23j18
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 0.75
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.3
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.3
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 24 1.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 1.3
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 1.3
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 5.3
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 9.2
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 24.6 bits (51), Expect = 0.75
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 233 NVSKYINESRYNDMLFKN-NVIRQ 165
N+S Y N++ YN L+ N N I Q
Sbjct: 92 NISNYNNDNNYNKKLYYNINYIEQ 115
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 421 NVSKYINESRYNDVLFKN-NVIRQ 353
N+S Y N++ YN L+ N N I Q
Sbjct: 92 NISNYNNDNNYNKKLYYNINYIEQ 115
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 327 NVSKYINESRYNDVLFKN-NVIRQ 259
N+S Y N++ YN L+ N N I Q
Sbjct: 92 NISNYNNDNNYNKKLYYNINYIEQ 115
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 139 NVSKYINESRYNDVLFKN-NVIRQ 71
N+S Y N++ YN L+ N N I Q
Sbjct: 92 NISNYNNDNNYNKKLYYNINYIEQ 115
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 515 NVSKYIKESRYNDVLFKN-NVIRQ 447
N+S Y ++ YN L+ N N I Q
Sbjct: 92 NISNYNNDNNYNKKLYYNINYIEQ 115
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 530 EEVKINVSKYIKESRYN 480
EE+K VS YIK+ YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 342 EEVKINVSKYINESRYN 292
EE+K VS YI + YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 248 EEVKINVSKYINESRYN 198
EE+K VS YI + YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 154 EEVKINVSKYINESRYN 104
EE+K VS YI + YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 530 EEVKINVSKYIKESRYN 480
EE+K VS YIK+ YN
Sbjct: 95 EEIKKEVSSYIKKIGYN 111
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 342 EEVKINVSKYINESRYN 292
EE+K VS YI + YN
Sbjct: 95 EEIKKEVSSYIKKIGYN 111
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 248 EEVKINVSKYINESRYN 198
EE+K VS YI + YN
Sbjct: 95 EEIKKEVSSYIKKIGYN 111
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 154 EEVKINVSKYINESRYN 104
EE+K VS YI + YN
Sbjct: 95 EEIKKEVSSYIKKIGYN 111
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 233 NVSKYINESRYNDMLFKN-NVIRQ 165
N+S Y N + YN L+ N N I Q
Sbjct: 92 NISNYNNNNNYNKKLYYNINYIEQ 115
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 421 NVSKYINESRYNDVLFKN-NVIRQ 353
N+S Y N + YN L+ N N I Q
Sbjct: 92 NISNYNNNNNYNKKLYYNINYIEQ 115
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 327 NVSKYINESRYNDVLFKN-NVIRQ 259
N+S Y N + YN L+ N N I Q
Sbjct: 92 NISNYNNNNNYNKKLYYNINYIEQ 115
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 139 NVSKYINESRYNDVLFKN-NVIRQ 71
N+S Y N + YN L+ N N I Q
Sbjct: 92 NISNYNNNNNYNKKLYYNINYIEQ 115
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 233 NVSKYINESRYNDMLFKN-NVIRQ 165
N+S Y N + YN L+ N N I Q
Sbjct: 330 NISNYNNNNNYNKKLYYNINYIEQ 353
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 421 NVSKYINESRYNDVLFKN-NVIRQ 353
N+S Y N + YN L+ N N I Q
Sbjct: 330 NISNYNNNNNYNKKLYYNINYIEQ 353
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 327 NVSKYINESRYNDVLFKN-NVIRQ 259
N+S Y N + YN L+ N N I Q
Sbjct: 330 NISNYNNNNNYNKKLYYNINYIEQ 353
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 139 NVSKYINESRYNDVLFKN-NVIRQ 71
N+S Y N + YN L+ N N I Q
Sbjct: 330 NISNYNNNNNYNKKLYYNINYIEQ 353
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 530 EEVKINVSKYIKESRYN 480
EE+K VS YIK+ YN
Sbjct: 111 EEIKKEVSSYIKKIGYN 127
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 342 EEVKINVSKYINESRYN 292
EE+K VS YI + YN
Sbjct: 111 EEIKKEVSSYIKKIGYN 127
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 248 EEVKINVSKYINESRYN 198
EE+K VS YI + YN
Sbjct: 111 EEIKKEVSSYIKKIGYN 127
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 154 EEVKINVSKYINESRYN 104
EE+K VS YI + YN
Sbjct: 111 EEIKKEVSSYIKKIGYN 127
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 530 EEVKINVSKYIKESRYN 480
EE+K VS YIK+ YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 342 EEVKINVSKYINESRYN 292
EE+K VS YI + YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 248 EEVKINVSKYINESRYN 198
EE+K VS YI + YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 154 EEVKINVSKYINESRYN 104
EE+K VS YI + YN
Sbjct: 168 EEIKKEVSSYIKKIGYN 184
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 5.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 597 ESENKSLALSNVKNNVIRQTIRRRSKNKRLKIY 499
E E SL ++ KNN I + +K KIY
Sbjct: 499 EEEAVSLLINFSKNNTIVDISKLVNKRNNAKIY 531
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 9.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 384 TCYLKITLFVKL*EEEVKINVSKYINESRYNDVLFKNNVIRQTIR 250
T +LK K EE I +S + E+ YN+ + +IRQ R
Sbjct: 212 TDFLKSVPIFKNLPEETLIKISDVLEETFYNN---GDYIIRQGAR 253
Score = 21.0 bits (42), Expect = 9.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 290 TCYLKITLFVKL*EEEVKINVSKYINESRYNDMLFKNNVIRQTIR 156
T +LK K EE I +S + E+ YN+ + +IRQ R
Sbjct: 212 TDFLKSVPIFKNLPEETLIKISDVLEETFYNN---GDYIIRQGAR 253
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,808
Number of Sequences: 438
Number of extensions: 2118
Number of successful extensions: 42
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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