Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23j07
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.59 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 212  VHRRD*PTVLRS*ASCPVVISPTQTS 135
            +H RD P VLR+    PVV+     S
Sbjct: 1099 LHHRDLPCVLRASTPAPVVLEAVHAS 1124


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 107 RSLRSCKTAMRIYNRFDMPITKCIALPVI 21
           R L+SC T +     + +PITK  A+ V+
Sbjct: 142 RGLKSCHTGVGRNVGYKIPITKLTAMGVL 170


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 107 RSLRSCKTAMRIYNRFDMPITKCIALPVI 21
           R L+SC T +     + +PITK  A+ V+
Sbjct: 142 RGLKSCHTGVGRNVGYKIPITKLTAMGVL 170


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 107 RSLRSCKTAMRIYNRFDMPITKCIALPVI 21
           R L+SC T +     + +PITK  A+ V+
Sbjct: 142 RGLKSCHTGVGRNVGYKIPITKLTAMGVL 170


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  KPVIYAHGRLTRPQTSSPIQH 122
           +P +Y   R   P+T  PI+H
Sbjct: 66  QPSVYPLLRFENPETHHPIRH 86


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +2

Query: 122 LLDRPMSAWEISLLGSL 172
           ++DR +  WE+++L S+
Sbjct: 120 IVDRDVPTWEVNILKSI 136


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 125 LDRPMSAWEISL 160
           LDRPM AW  ++
Sbjct: 654 LDRPMWAWNFTI 665


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 125 LDRPMSAWEISL 160
           LDRPM AW  ++
Sbjct: 654 LDRPMWAWNFTI 665


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 199 SLLWTRLQHFRKKIRYDILRSTLRDHMDNNISYG 300
           S+ W RL    K + Y  +    +  MD++ ++G
Sbjct: 509 SVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFG 542


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 148 PRRHRPV 128
           PRRHRPV
Sbjct: 111 PRRHRPV 117


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 199 SLLWTRLQHFRKKIRYDILRSTLRDHMDNNISYG 300
           S+ W RL    K + Y  +    +  MD++ ++G
Sbjct: 509 SVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFG 542


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,509
Number of Sequences: 438
Number of extensions: 3343
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)