Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23i23
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.8  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   3.8  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   3.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   3.8  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   3.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   3.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 136 ITKSGADFVRYYYDYECNEPLV 201
           + KS A FV+  Y+   NEP+V
Sbjct: 52  VKKSTAHFVKDIYEKYKNEPMV 73


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 242 EDPRMLSYMVLKTLCNRTPNYK 307
           ++P+++S +  KT+ N   NYK
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYK 98


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 242 EDPRMLSYMVLKTLCNRTPNYK 307
           ++P+++S +  KT+ N   NYK
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYK 98


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 242 EDPRMLSYMVLKTLCNRTPNYK 307
           ++P+++S +  KT+ N   NYK
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYK 98


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 242 EDPRMLSYMVLKTLCNRTPNYK 307
           ++P+++S +  KT+ N   NYK
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYK 98


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 242 EDPRMLSYMVLKTLCNRTPNYK 307
           ++P+++S +  KT+ N   NYK
Sbjct: 310 KEPKIISSLSNKTIHNNNNNYK 331


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +1

Query: 154 DFVRYYYDYECNEPLVANSKLSATSSLRD 240
           D + Y +D++    L+ ++  S ++S+RD
Sbjct: 389 DILGYNFDFQNKNNLIPSALQSYSTSMRD 417


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +1

Query: 154 DFVRYYYDYECNEPLVANSKLSATSSLRD 240
           D + Y +D++    L+ ++  S ++S+RD
Sbjct: 389 DILGYNFDFQNKNNLIPSALQSYSTSMRD 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,128
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)