Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23i16
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.1  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   7.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   7.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.2  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 322 VLSVSMLTMNICWWPTHLDSQL 387
           +LS  ++T  ICW P H+   L
Sbjct: 261 MLSAVVITFFICWAPFHVQRLL 282


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 453 TFGRYLSLHQNQQYQRIIYYCKQ 385
           TFGR  S H N  Y   I + ++
Sbjct: 594 TFGRLTSKHDNSLYDEYIPFLER 616


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 243 FKEYVKSPPRDYSFVVMFTAMAPARRCAICQHV 341
           FK+  K PP+D+  V     + PA    +   V
Sbjct: 76  FKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRV 108


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 231 NINKFKEYVKSP 266
           NIN F  YVK+P
Sbjct: 230 NINGFDPYVKTP 241


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 243 FKEYVKSPPRDYSFVVMFTAMAPARRCAICQHV 341
           FK+  K PP+D+  V     + PA    +   V
Sbjct: 92  FKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRV 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,687
Number of Sequences: 438
Number of extensions: 2784
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)