Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23h17
         (163 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   0.79 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   7.4  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 0.79
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 109 NYWQNSDEKSNV 74
           NYWQ +D+K+++
Sbjct: 64  NYWQCNDKKTDI 75


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
          phosphatase protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 64 DSYLHYSFRP 93
          D YL+Y F P
Sbjct: 26 DPYLYYDFYP 35


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
          precursor protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 64 DSYLHYSFRP 93
          D YL+Y F P
Sbjct: 41 DPYLYYDFYP 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,364
Number of Sequences: 438
Number of extensions: 501
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used:  2637780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)