Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23h12
         (520 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   2.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   2.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.7  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   7.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   7.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   7.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   7.6  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   7.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   7.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.6  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   7.6  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 513 RLRPPVLSRFGS 478
           RLRPP+  RFGS
Sbjct: 175 RLRPPLNPRFGS 186


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 513 RLRPPVLSRFGS 478
           RLRPP+  RFGS
Sbjct: 175 RLRPPLNPRFGS 186


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 391 MWLT*NSDQNWLLGW 435
           +W   + DQ W+L W
Sbjct: 595 LWYVPSLDQVWILNW 609


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 160 RLRPPLNPRFG 170


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 160 RLRPPLNPRFG 170


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 160 RLRPPLNPRFG 170


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 160 RLRPPLNPRFG 170


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 160 RLRPPLNPRFG 170


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 160 RLRPPLNPRFG 170


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 172 RLRPPLNPRFG 182


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 172 RLRPPLNPRFG 182


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 513 RLRPPVLSRFG 481
           RLRPP+  RFG
Sbjct: 400 RLRPPLNPRFG 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,667
Number of Sequences: 438
Number of extensions: 3621
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)