Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23g17
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.28 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   4.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   4.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   8.0  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 213 SDDVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEES 329
           +DD  ++       FK F KG KN      +  GG++++
Sbjct: 40  ADDSDEEELSARPSFKTFDKGPKNYTTPVNFVAGGIQQA 78


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/31 (29%), Positives = 22/31 (70%)
 Frame = +3

Query: 39  YIEVSKFITHEFKYSSKMFKFSLFHLLFLAT 131
           ++EV++ I + +  S+K+ + +L HL+ +A+
Sbjct: 383 HVEVARLIRNYYFESNKIDETTLKHLIDVAS 413


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/31 (29%), Positives = 22/31 (70%)
 Frame = +3

Query: 39  YIEVSKFITHEFKYSSKMFKFSLFHLLFLAT 131
           ++EV++ I + +  S+K+ + +L HL+ +A+
Sbjct: 383 HVEVARLIRNYYFESNKIDETTLKHLIDVAS 413


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 129 TAVQVVLSLREGDCEVCVKTVXKF 200
           T V ++  LR    EVC KT+  +
Sbjct: 454 TKVGLITILRNHKVEVCEKTIIPY 477


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 168 CEVCVKTVXKFAATLSDDVKKDPKKIEAEFKKFCKGSK---NKENRF 299
           CE   K    +       VK +P K++  F+    G+K    + NRF
Sbjct: 163 CEKYEKNGETYLRIKKHAVKFNPAKVKLRFENLFDGNKELGEQMNRF 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,095
Number of Sequences: 438
Number of extensions: 1777
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)