Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23f19
         (272 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.22 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   6.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   8.4  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.22
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 32  RQRRHSFSSCVD*LNVNKY*RKNNNIKTRKSLCV 133
           R RRHS S C+   ++N   R  N  + R++ C+
Sbjct: 347 RSRRHSDSCCLCLDSMNAVIRNFNESENRRNSCL 380


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 189 WSTKSSLIAEVIHGLHLHXTH 127
           WS+K+   A V+H ++    H
Sbjct: 222 WSSKTETNATVLHSINKVIIH 242


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 164 AIKEDLVDHRNLNGKE 211
           ++KE+L  HR ++ KE
Sbjct: 130 SVKENLSVHRRIHTKE 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,086
Number of Sequences: 438
Number of extensions: 820
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)