Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23f09
(460 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U85625-1|AAC51363.2| 256|Homo sapiens ribonuclease 6 precursor ... 65 1e-10
BC051912-1|AAH51912.1| 256|Homo sapiens ribonuclease T2 protein. 65 1e-10
BC039713-1|AAH39713.1| 256|Homo sapiens ribonuclease T2 protein. 65 1e-10
BC001819-1|AAH01819.1| 256|Homo sapiens ribonuclease T2 protein. 65 1e-10
BC001660-1|AAH01660.1| 256|Homo sapiens ribonuclease T2 protein. 65 1e-10
AL159163-1|CAI15001.1| 256|Homo sapiens RP11-514O12.3 protein. 65 1e-10
AL133458-3|CAI21600.1| 256|Homo sapiens RP11-514O12.3 protein. 65 1e-10
AJ419865-1|CAD12030.1| 256|Homo sapiens extra-cellular ribonucl... 65 1e-10
AL133458-2|CAI21598.1| 207|Homo sapiens RP11-514O12.3 protein. 64 2e-10
AJ419867-1|CAD12032.1| 240|Homo sapiens extra-cellular ribonucl... 64 2e-10
AJ419866-1|CAD12031.1| 121|Homo sapiens extra-cellular ribonucl... 64 2e-10
>U85625-1|AAC51363.2| 256|Homo sapiens ribonuclease 6 precursor
protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>BC051912-1|AAH51912.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>BC039713-1|AAH39713.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>BC001819-1|AAH01819.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>BC001660-1|AAH01660.1| 256|Homo sapiens ribonuclease T2 protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>AL159163-1|CAI15001.1| 256|Homo sapiens RP11-514O12.3 protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>AL133458-3|CAI21600.1| 256|Homo sapiens RP11-514O12.3 protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>AJ419865-1|CAD12030.1| 256|Homo sapiens extra-cellular
ribonuclease protein.
Length = 256
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVKSI 441
+ CN++W F+ +++K +
Sbjct: 72 SEG-----CNRSWPFNLEEIKDL 89
>AL133458-2|CAI21598.1| 207|Homo sapiens RP11-514O12.3 protein.
Length = 207
Score = 64.1 bits (149), Expect = 2e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVK 435
+ CN++W F+ +++K
Sbjct: 72 SEG-----CNRSWPFNLEEIK 87
>AJ419867-1|CAD12032.1| 240|Homo sapiens extra-cellular
ribonuclease protein.
Length = 240
Score = 64.1 bits (149), Expect = 2e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVK 435
+ CN++W F+ +++K
Sbjct: 72 SEG-----CNRSWPFNLEEIK 87
>AJ419866-1|CAD12031.1| 121|Homo sapiens extra-cellular
ribonuclease protein.
Length = 121
Score = 64.1 bits (149), Expect = 2e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 193 LSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 372
L C A+ N+EW LI QHWP T+C EK + C P + WTIHG+WP+K
Sbjct: 18 LLCLGGADKRLRDNHEWKKLIMVQHWPETVC----EKIQNDCRDPPDY--WTIHGLWPDK 71
Query: 373 NHSMGPFFCNKTWSFDPDQVK 435
+ CN++W F+ +++K
Sbjct: 72 SEG-----CNRSWPFNLEEIK 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,063,326
Number of Sequences: 237096
Number of extensions: 1510559
Number of successful extensions: 1955
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -