Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23f09
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74932-1|CAA52884.1|  325|Drosophila melanogaster DmRNase-66B pr...    97   8e-21
BT015993-1|AAV36878.1|  350|Drosophila melanogaster RE50319p pro...    97   8e-21
AY060258-1|AAL25297.1|  257|Drosophila melanogaster GH08338p pro...    97   8e-21
AE014296-1348|AAF50502.1|  325|Drosophila melanogaster CG8194-PA...    97   8e-21
BT001777-1|AAN71532.1|  143|Drosophila melanogaster RH14203p pro...    29   2.3  
AY119637-1|AAM50291.1|  408|Drosophila melanogaster RE43130p pro...    29   4.0  
AE014297-1646|AAF54920.2|  408|Drosophila melanogaster CG8630-PA...    29   4.0  

>X74932-1|CAA52884.1|  325|Drosophila melanogaster DmRNase-66B
           protein.
          Length = 325

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = +1

Query: 229 KNNEWDFLIFTQHWPATICRIWMEK-PTHSCIMPHEQNSWTIHGIWPNKNHSMGPFFCNK 405
           +++ WD LIFTQ WP T C  W E+ P   C +P ++  WTIHGIWP K H MGP FCN 
Sbjct: 72  QDHNWDVLIFTQQWPVTTCYHWREENPDQECSLPQKKEFWTIHGIWPTKLHQMGPNFCNN 131

Query: 406 TWSFDPDQVKSIETDLE 456
           + +FDP ++  IE  LE
Sbjct: 132 SANFDPSKLNPIEDRLE 148


>BT015993-1|AAV36878.1|  350|Drosophila melanogaster RE50319p
           protein.
          Length = 350

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = +1

Query: 229 KNNEWDFLIFTQHWPATICRIWMEK-PTHSCIMPHEQNSWTIHGIWPNKNHSMGPFFCNK 405
           +++ WD LIFTQ WP T C  W E+ P   C +P ++  WTIHGIWP K H MGP FCN 
Sbjct: 97  QDHNWDVLIFTQQWPVTTCYHWREENPDQECSLPQKKEFWTIHGIWPTKLHQMGPNFCNN 156

Query: 406 TWSFDPDQVKSIETDLE 456
           + +FDP ++  IE  LE
Sbjct: 157 SANFDPSKLNPIEDRLE 173


>AY060258-1|AAL25297.1|  257|Drosophila melanogaster GH08338p
           protein.
          Length = 257

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = +1

Query: 229 KNNEWDFLIFTQHWPATICRIWMEK-PTHSCIMPHEQNSWTIHGIWPNKNHSMGPFFCNK 405
           +++ WD LIFTQ WP T C  W E+ P   C +P ++  WTIHGIWP K H MGP FCN 
Sbjct: 4   QDHNWDVLIFTQQWPVTTCYHWREENPDQECSLPQKKEFWTIHGIWPTKLHQMGPNFCNN 63

Query: 406 TWSFDPDQVKSIETDLE 456
           + +FDP ++  IE  LE
Sbjct: 64  SANFDPSKLNPIEDRLE 80


>AE014296-1348|AAF50502.1|  325|Drosophila melanogaster CG8194-PA
           protein.
          Length = 325

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = +1

Query: 229 KNNEWDFLIFTQHWPATICRIWMEK-PTHSCIMPHEQNSWTIHGIWPNKNHSMGPFFCNK 405
           +++ WD LIFTQ WP T C  W E+ P   C +P ++  WTIHGIWP K H MGP FCN 
Sbjct: 72  QDHNWDVLIFTQQWPVTTCYHWREENPDQECSLPQKKEFWTIHGIWPTKLHQMGPNFCNN 131

Query: 406 TWSFDPDQVKSIETDLE 456
           + +FDP ++  IE  LE
Sbjct: 132 SANFDPSKLNPIEDRLE 148


>BT001777-1|AAN71532.1|  143|Drosophila melanogaster RH14203p
           protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 296 IHILHIVAGQCCVNIRKSHSLFFVSLSSAYVKHDSKNI 183
           IH +H+  G+CC   R++H  + + + S  +    KNI
Sbjct: 82  IHSMHLAVGKCCA--RRTHHFYAIEMFSRNLYSLDKNI 117


>AY119637-1|AAM50291.1|  408|Drosophila melanogaster RE43130p
           protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 287 EYGWRNLRTLVLCHTSRIHGLFMVYGQ 367
           E  WRN+   V+ H+  ++GL++V+ +
Sbjct: 61  EIVWRNVGLFVILHSMALYGLYLVFAE 87


>AE014297-1646|AAF54920.2|  408|Drosophila melanogaster CG8630-PA
           protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 287 EYGWRNLRTLVLCHTSRIHGLFMVYGQ 367
           E  WRN+   V+ H+  ++GL++V+ +
Sbjct: 61  EIVWRNVGLFVILHSMALYGLYLVFAE 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,661,512
Number of Sequences: 53049
Number of extensions: 437231
Number of successful extensions: 820
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)