Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23f08
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12778-1|AAA74424.1| 432|Homo sapiens acyl-CoA dehydrogenase pr... 82 8e-16
BC013756-1|AAH13756.1| 432|Homo sapiens acyl-Coenzyme A dehydro... 82 8e-16
AL831821-1|CAD38535.2| 427|Homo sapiens hypothetical protein pr... 82 8e-16
AL731666-2|CAI10847.1| 432|Homo sapiens acyl-Coenzyme A dehydro... 82 8e-16
AL731666-1|CAI10846.1| 170|Homo sapiens acyl-Coenzyme A dehydro... 82 8e-16
AF260678-1|AAF97921.1| 432|Homo sapiens short/branched chain ac... 82 8e-16
M34192-1|AAA52711.1| 423|Homo sapiens IVD protein. 52 1e-06
BT007145-1|AAP35809.1| 423|Homo sapiens isovaleryl Coenzyme A d... 52 1e-06
BC017202-1|AAH17202.1| 423|Homo sapiens isovaleryl Coenzyme A d... 52 1e-06
AF191218-1|AAF20182.1| 423|Homo sapiens isovaleryl dehydrogenas... 52 1e-06
Z80345-1|CAB02492.1| 412|Homo sapiens acyl-CoA dehydrogenase pr... 35 0.095
U83992-1|AAD00552.1| 412|Homo sapiens short chain acyl CoA dehy... 35 0.095
M26393-1|AAA60307.1| 412|Homo sapiens ACADS protein. 35 0.095
BC025963-1|AAH25963.1| 412|Homo sapiens acyl-Coenzyme A dehydro... 35 0.095
M91432-1|AAA59567.1| 421|Homo sapiens medium-chain acyl-CoA deh... 33 0.51
M16827-1|AAA51566.1| 421|Homo sapiens ACADM protein. 33 0.51
BC005377-1|AAH05377.1| 421|Homo sapiens acyl-Coenzyme A dehydro... 33 0.51
AL357314-1|CAI22390.1| 421|Homo sapiens acyl-Coenzyme A dehydro... 33 0.51
AF251043-1|AAF63626.1| 425|Homo sapiens medium-chain acyl-CoA d... 32 0.67
BC126372-1|AAI26373.1| 498|Homo sapiens TRIM46 protein protein. 29 6.2
BC069568-1|AAH69568.1| 498|Homo sapiens TRIM46 protein protein. 29 6.2
BC069416-1|AAH69416.1| 498|Homo sapiens TRIM46 protein protein. 29 6.2
AK128139-1|BAC87293.1| 524|Homo sapiens protein ( Homo sapiens ... 29 6.2
>U12778-1|AAA74424.1| 432|Homo sapiens acyl-CoA dehydrogenase
protein.
Length = 432
Score = 81.8 bits (193), Expect = 8e-16
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +1
Query: 160 PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYS 339
PL T+ E+ ++ +++K EQI+PLV M++ +++ + Q LF GLMGI EY
Sbjct: 53 PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 112
Query: 340 GSGCNFLTMMLVVEELSRVDPAVAAY 417
G+G +FL+ +LV+EEL++VD +VA +
Sbjct: 113 GTGASFLSTVLVIEELAKVDASVAVF 138
>BC013756-1|AAH13756.1| 432|Homo sapiens acyl-Coenzyme A
dehydrogenase, short/branched chain protein.
Length = 432
Score = 81.8 bits (193), Expect = 8e-16
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +1
Query: 160 PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYS 339
PL T+ E+ ++ +++K EQI+PLV M++ +++ + Q LF GLMGI EY
Sbjct: 53 PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 112
Query: 340 GSGCNFLTMMLVVEELSRVDPAVAAY 417
G+G +FL+ +LV+EEL++VD +VA +
Sbjct: 113 GTGASFLSTVLVIEELAKVDASVAVF 138
>AL831821-1|CAD38535.2| 427|Homo sapiens hypothetical protein
protein.
Length = 427
Score = 81.8 bits (193), Expect = 8e-16
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +1
Query: 160 PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYS 339
PL T+ E+ ++ +++K EQI+PLV M++ +++ + Q LF GLMGI EY
Sbjct: 48 PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 107
Query: 340 GSGCNFLTMMLVVEELSRVDPAVAAY 417
G+G +FL+ +LV+EEL++VD +VA +
Sbjct: 108 GTGASFLSTVLVIEELAKVDASVAVF 133
>AL731666-2|CAI10847.1| 432|Homo sapiens acyl-Coenzyme A
dehydrogenase, short/branched chain protein.
Length = 432
Score = 81.8 bits (193), Expect = 8e-16
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +1
Query: 160 PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYS 339
PL T+ E+ ++ +++K EQI+PLV M++ +++ + Q LF GLMGI EY
Sbjct: 53 PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 112
Query: 340 GSGCNFLTMMLVVEELSRVDPAVAAY 417
G+G +FL+ +LV+EEL++VD +VA +
Sbjct: 113 GTGASFLSTVLVIEELAKVDASVAVF 138
>AL731666-1|CAI10846.1| 170|Homo sapiens acyl-Coenzyme A
dehydrogenase, short/branched chain protein.
Length = 170
Score = 81.8 bits (193), Expect = 8e-16
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +1
Query: 160 PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYS 339
PL T+ E+ ++ +++K EQI+PLV M++ +++ + Q LF GLMGI EY
Sbjct: 58 PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 117
Query: 340 GSGCNFLTMMLVVEELSRVDPAVAAY 417
G+G +FL+ +LV+EEL++VD +VA +
Sbjct: 118 GTGASFLSTVLVIEELAKVDASVAVF 143
>AF260678-1|AAF97921.1| 432|Homo sapiens short/branched chain
acyl-CoA dehydrogenase protein.
Length = 432
Score = 81.8 bits (193), Expect = 8e-16
Identities = 35/86 (40%), Positives = 58/86 (67%)
Frame = +1
Query: 160 PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYS 339
PL T+ E+ ++ +++K EQI+PLV M++ +++ + Q LF GLMGI EY
Sbjct: 53 PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 112
Query: 340 GSGCNFLTMMLVVEELSRVDPAVAAY 417
G+G +FL+ +LV+EEL++VD +VA +
Sbjct: 113 GTGASFLSTVLVIEELAKVDASVAVF 138
>M34192-1|AAA52711.1| 423|Homo sapiens IVD protein.
Length = 423
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 130 KAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKME--DEXRIDDGIRQMLFDN 303
+A+S + L+E + +R+T+ K E ++P ++++ +E + + L +
Sbjct: 28 RAHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNL 87
Query: 304 GLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAV 408
G++GI PV+Y GSG +L +LV+EE+SR AV
Sbjct: 88 GVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 122
>BT007145-1|AAP35809.1| 423|Homo sapiens isovaleryl Coenzyme A
dehydrogenase protein.
Length = 423
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 130 KAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKME--DEXRIDDGIRQMLFDN 303
+A+S + L+E + +R+T+ K E ++P ++++ +E + + L +
Sbjct: 28 RAHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNL 87
Query: 304 GLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAV 408
G++GI PV+Y GSG +L +LV+EE+SR AV
Sbjct: 88 GVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 122
>BC017202-1|AAH17202.1| 423|Homo sapiens isovaleryl Coenzyme A
dehydrogenase protein.
Length = 423
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 130 KAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKME--DEXRIDDGIRQMLFDN 303
+A+S + L+E + +R+T+ K E ++P ++++ +E + + L +
Sbjct: 28 RAHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNL 87
Query: 304 GLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAV 408
G++GI PV+Y GSG +L +LV+EE+SR AV
Sbjct: 88 GVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 122
>AF191218-1|AAF20182.1| 423|Homo sapiens isovaleryl dehydrogenase
protein.
Length = 423
Score = 51.6 bits (118), Expect = 1e-06
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 130 KAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKME--DEXRIDDGIRQMLFDN 303
+A+S + L+E + +R+T+ K E ++P ++++ +E + + L +
Sbjct: 28 RAHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNL 87
Query: 304 GLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAV 408
G++GI PV+Y GSG +L +LV+EE+SR AV
Sbjct: 88 GVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAV 122
>Z80345-1|CAB02492.1| 412|Homo sapiens acyl-CoA dehydrogenase
protein.
Length = 412
Score = 35.1 bits (77), Expect = 0.095
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
L E + +T R +++ P+ +++ E + + GL+ + P E G+G
Sbjct: 34 LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGL 93
Query: 352 NFLTMMLVVEELSR 393
++L + +EE+SR
Sbjct: 94 DYLAYAIAMEEISR 107
>U83992-1|AAD00552.1| 412|Homo sapiens short chain acyl CoA
dehydrogenase protein.
Length = 412
Score = 35.1 bits (77), Expect = 0.095
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
L E + +T R +++ P+ +++ E + + GL+ + P E G+G
Sbjct: 34 LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGL 93
Query: 352 NFLTMMLVVEELSR 393
++L + +EE+SR
Sbjct: 94 DYLAYAIAMEEISR 107
>M26393-1|AAA60307.1| 412|Homo sapiens ACADS protein.
Length = 412
Score = 35.1 bits (77), Expect = 0.095
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
L E + +T R +++ P+ +++ E + + GL+ + P E G+G
Sbjct: 34 LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGL 93
Query: 352 NFLTMMLVVEELSR 393
++L + +EE+SR
Sbjct: 94 DYLAYAIAMEEISR 107
>BC025963-1|AAH25963.1| 412|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-2 to C-3 short chain protein.
Length = 412
Score = 35.1 bits (77), Expect = 0.095
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
L E + +T R +++ P+ +++ E + + GL+ + P E G+G
Sbjct: 34 LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGL 93
Query: 352 NFLTMMLVVEELSR 393
++L + +EE+SR
Sbjct: 94 DYLAYAIAMEEISR 107
>M91432-1|AAA59567.1| 421|Homo sapiens medium-chain acyl-CoA
dehydrogenase protein.
Length = 421
Score = 32.7 bits (71), Expect = 0.51
Identities = 28/112 (25%), Positives = 44/112 (39%)
Frame = +1
Query: 55 RVVGNXILEQWRSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQIS 234
RV+ + WRSQ T A + +S E TE + + T RK E+I
Sbjct: 10 RVLRSISRFHWRSQHTKANRQREPGLGFSFE--------FTEQQKEFQATARKFAREEII 61
Query: 235 PLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELS 390
P+ + + + + ++ GLM P G G L+ EEL+
Sbjct: 62 PVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELA 113
>M16827-1|AAA51566.1| 421|Homo sapiens ACADM protein.
Length = 421
Score = 32.7 bits (71), Expect = 0.51
Identities = 28/112 (25%), Positives = 44/112 (39%)
Frame = +1
Query: 55 RVVGNXILEQWRSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQIS 234
RV+ + WRSQ T A + +S E TE + + T RK E+I
Sbjct: 10 RVLRSISRFHWRSQHTKANRQREPGLGFSFE--------FTEQQKEFQATARKFAREEII 61
Query: 235 PLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELS 390
P+ + + + + ++ GLM P G G L+ EEL+
Sbjct: 62 PVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELA 113
>BC005377-1|AAH05377.1| 421|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-4 to C-12 straight chain protein.
Length = 421
Score = 32.7 bits (71), Expect = 0.51
Identities = 28/112 (25%), Positives = 44/112 (39%)
Frame = +1
Query: 55 RVVGNXILEQWRSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQIS 234
RV+ + WRSQ T A + +S E TE + + T RK E+I
Sbjct: 10 RVLRSISRFHWRSQHTKANRQREPGLGFSFE--------FTEQQKEFQATARKFAREEII 61
Query: 235 PLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELS 390
P+ + + + + ++ GLM P G G L+ EEL+
Sbjct: 62 PVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELA 113
>AL357314-1|CAI22390.1| 421|Homo sapiens acyl-Coenzyme A
dehydrogenase, C-4 to C-12 straight chain protein.
Length = 421
Score = 32.7 bits (71), Expect = 0.51
Identities = 28/112 (25%), Positives = 44/112 (39%)
Frame = +1
Query: 55 RVVGNXILEQWRSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQIS 234
RV+ + WRSQ T A + +S E TE + + T RK E+I
Sbjct: 10 RVLRSISRFHWRSQHTKANRQREPGLGFSFE--------FTEQQKEFQATARKFAREEII 61
Query: 235 PLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELS 390
P+ + + + + ++ GLM P G G L+ EEL+
Sbjct: 62 PVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELA 113
>AF251043-1|AAF63626.1| 425|Homo sapiens medium-chain acyl-CoA
dehydrogenase protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.67
Identities = 26/102 (25%), Positives = 40/102 (39%)
Frame = +1
Query: 85 WRSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEX 264
WRSQ T A + +S E TE + + T RK E+I P+ + +
Sbjct: 24 WRSQHTKANRQREPGLGFSFE--------FTEQQKEFQATARKFAREEIIPVAAEYDKTG 75
Query: 265 RIDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELS 390
+ + ++ GLM P G G L+ EEL+
Sbjct: 76 EYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELA 117
>BC126372-1|AAI26373.1| 498|Homo sapiens TRIM46 protein protein.
Length = 498
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 150 NFCAVCFHXSLCSNGXRCLGPP 85
NF C H LCS +CL PP
Sbjct: 425 NFLRGCGHRGLCSGAPQCLRPP 446
>BC069568-1|AAH69568.1| 498|Homo sapiens TRIM46 protein protein.
Length = 498
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 150 NFCAVCFHXSLCSNGXRCLGPP 85
NF C H LCS +CL PP
Sbjct: 425 NFLRGCGHRGLCSGAPQCLRPP 446
>BC069416-1|AAH69416.1| 498|Homo sapiens TRIM46 protein protein.
Length = 498
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 150 NFCAVCFHXSLCSNGXRCLGPP 85
NF C H LCS +CL PP
Sbjct: 425 NFLRGCGHRGLCSGAPQCLRPP 446
>AK128139-1|BAC87293.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ46260 fis, clone TESTI4024494, weakly similar
to Homo sapiens zinc-binding protein Rbcc728. ).
Length = 524
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 150 NFCAVCFHXSLCSNGXRCLGPP 85
NF C H LCS +CL PP
Sbjct: 451 NFLRGCGHRGLCSGAPQCLRPP 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,153,823
Number of Sequences: 237096
Number of extensions: 1290987
Number of successful extensions: 3045
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3036
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -