Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23f08
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 90 5e-19
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 83 6e-17
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 71 3e-13
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 59 1e-09
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 59 1e-09
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 49 1e-06
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 46 8e-06
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 38 0.003
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 31 0.25
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 2.4
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 28 3.1
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 28 3.1
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 27 4.1
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z54327-9|CAA91122.2| 839|Caenorhabditis elegans Hypothetical pr... 26 9.5
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 26 9.5
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 26 9.5
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 26 9.5
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 90.2 bits (214), Expect = 5e-19
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +1
Query: 73 ILEQWRSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKM 252
I+ RS + A TP P+ +LTE EL +T+RK + + PLV++M
Sbjct: 15 IISTIRSSYSTATAVSISRHCEDFTGTPPPVNLLTENELFFADTVRKFSKDVVKPLVREM 74
Query: 253 EDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAVAA 414
+ ++ + Q +F+NGLMG+ P EY GSG +F M+V+EEL++ DP+V+A
Sbjct: 75 DKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSA 128
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 83.4 bits (197), Expect = 6e-17
Identities = 40/110 (36%), Positives = 64/110 (58%)
Frame = +1
Query: 88 RSQATXAVGAKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXR 267
RS A T +A+ P PL L+E E ++ T+R+ I PLV++M+D+ +
Sbjct: 12 RSAAPVVATMSTKPRAHIDGHVPSPLQQLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQ 71
Query: 268 IDDGIRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAVAAY 417
+ + F+NGLMGI P +Y G G +F +LV+EEL++VDP+V+ +
Sbjct: 72 MHQSVITGTFENGLMGIEIPEKYGGPGSSFFDAVLVIEELAKVDPSVSVF 121
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 70.9 bits (166), Expect = 3e-13
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +1
Query: 106 AVGAKTXMKAYSTEVTPR--PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDG 279
A+ + + S + PR PL L E E + E ++ + PLV++M+ + RI+
Sbjct: 12 AISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQ 71
Query: 280 IRQMLFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAVA 411
+ + FD LMG+ +Y GSG +F ++L VEELS++DPA+A
Sbjct: 72 LLKKAFDLKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIA 115
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 58.8 bits (136), Expect = 1e-09
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDD--GIRQMLFDNGLMGIXTPVEYSGS 345
L + E+A+R++IR+ ++++P K++ + D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 346 GCNFLTMMLVVEELSRVDPAVA 411
G N+ + ++ +EELSR +A
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIA 120
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 58.8 bits (136), Expect = 1e-09
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDD--GIRQMLFDNGLMGIXTPVEYSGS 345
L + E+A+R++IR+ ++++P K++ + D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 346 GCNFLTMMLVVEELSRVDPAVA 411
G N+ + ++ +EELSR +A
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIA 120
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 295 FDNGLMGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAVAA 414
F+NGLMGI P +Y G G F LV+EE+S+VD +V A
Sbjct: 16 FENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGA 55
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 46.4 bits (105), Expect = 8e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 310 MGIXTPVEYSGSGCNFLTMMLVVEELSRVDPAVAA 414
MG+ P EY GSG +F M+V+EEL++ DP+V+A
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSA 35
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 44.0 bits (99), Expect = 4e-05
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 178 EXELAMRETIRKLXTEQISPLVKKMEDEXRIDDG-IRQMLFDNGLMGIXTPVEYSGSGCN 354
E AM+ ++ KL E+I+P V + E R + +ML G+ + PV+Y G+G +
Sbjct: 27 EPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRD 86
Query: 355 FLTMMLVVEELSRVD 399
F + + E++ VD
Sbjct: 87 FAMSIAIAEQIGAVD 101
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +1
Query: 115 AKTXMKAYSTEVTPRPLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDG-IRQM 291
A T S + R + E M++++ KL E+I+P V K E + R + +M
Sbjct: 40 AVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKM 99
Query: 292 LFDNGLMGIXTPVEYSGSGCNFLTMMLVVEELSRVD 399
L D+G+ G+ P + G+G + + E++ ++
Sbjct: 100 LGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAIN 135
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 106 AVGAKTXMKAYSTEVTPR--PLTMLTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDG 279
A+ + + S + PR PL L E E + E ++ + PLV++M+ + RI+
Sbjct: 12 AISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQ 71
Query: 280 IRQMLFDNGLMGI 318
+ + FD LMG+
Sbjct: 72 LLKKAFDLKLMGL 84
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
L+E + +++ K + + P K ++ I + GLM P +Y G G
Sbjct: 31 LSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGM 90
Query: 352 NFLTMMLVVEELS 390
L L+VE LS
Sbjct: 91 TTLETALIVEALS 103
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 303 WVDGHXNSGRIQRFRLQFPDNDVGGGRTVSSGPSR 407
W DGH F PDND G GR GP R
Sbjct: 123 WTDGHTTGTEAMVFGPGQPDNDHGAGR----GPQR 153
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 331 LPEFXCPSTHYQTTSVGYHHRCGVHLPFSSQADLFVRSXVSVLFPS 194
L + C T +T S+G H G HLP+ V ++ FPS
Sbjct: 532 LESYSCIVTRAETLSIGDHFLVGPHLPYHFPILGKVFQNITESFPS 577
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 331 LPEFXCPSTHYQTTSVGYHHRCGVHLPFSSQADLFVRSXVSVLFPS 194
L + C T +T S+G H G HLP+ V ++ FPS
Sbjct: 482 LESYSCIVTRAETLSIGDHFLVGPHLPYHFPILGKVFQNITESFPS 527
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/73 (19%), Positives = 31/73 (42%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
LT + R +RK +++ P+ + + I + G + P Y G G
Sbjct: 28 LTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPEAYGGLGV 87
Query: 352 NFLTMMLVVEELS 390
+ ++ ++ EE++
Sbjct: 88 DMVSNCIISEEMA 100
>AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical
protein Y46H3D.6 protein.
Length = 345
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 220 SXVSVLFPSWRVHXQSAWSKV 158
S S+L P WR+H Q+ W ++
Sbjct: 217 SVASILEPYWRLHHQTLWEQM 237
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 414 GGHGWVHSRQFFHHQHHCQEIAAGTAVFYRSXDAHQPIIKQHLSDTI 274
G H HS +H+ HH + Y + +HQ + HL+ +
Sbjct: 16 GMHNQTHSTPQYHNHHHHHHQSPTYPQSYFNPYSHQSYQQHHLNSDV 62
>Z54327-9|CAA91122.2| 839|Caenorhabditis elegans Hypothetical
protein C26D10.4 protein.
Length = 839
Score = 26.2 bits (55), Expect = 9.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -2
Query: 414 GGHGWVHSRQFFHHQHHCQEIAAG---TAVFYRSXDAHQPIIKQ-HLSDTIIDAXFIFHF 247
GG+G+V + +C +IAA T V+ DA + K+ ++ D D+ F F
Sbjct: 105 GGNGYVFDTYLSNSVKNCSKIAANSTHTGVWIVGSDASWKLEKELNMFDLPQDSITGFTF 164
Query: 246 LHKRTYL 226
L K+ L
Sbjct: 165 LEKKNQL 171
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 322 FXCPSTHY-QTTSVGYHHRCGVHLPFSSQADLFVRSXVSV 206
+ CP + Q+T Y H CG + F S+ + +S+
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHFIISI 99
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +1
Query: 172 LTEXELAMRETIRKLXTEQISPLVKKMEDEXRIDDGIRQMLFDNGLMGIXTPVEYSGSGC 351
L++ + ++ K + + P K + I + G M P +Y G G
Sbjct: 25 LSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGPGL 84
Query: 352 NFLTMMLVVEELS 390
+ L L+VE LS
Sbjct: 85 SNLDTALIVEALS 97
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 90 VPGNGCRWSKDSXESIQHRSYPT 158
+ +GCRW+K+ I R YPT
Sbjct: 828 ISNDGCRWTKE--HQINKRRYPT 848
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,124,398
Number of Sequences: 27780
Number of extensions: 200907
Number of successful extensions: 576
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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