Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23e17
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010620-1|AAH10620.1|  487|Homo sapiens solute carrier family 3...    29   6.6  
AK074949-1|BAC11310.1|  487|Homo sapiens protein ( Homo sapiens ...    29   6.6  
AK074797-1|BAC11215.1|  413|Homo sapiens protein ( Homo sapiens ...    29   6.6  
AK074758-1|BAC11186.1|  326|Homo sapiens protein ( Homo sapiens ...    29   6.6  
AK027825-1|BAB55394.1|  487|Homo sapiens protein ( Homo sapiens ...    29   6.6  
AF271070-1|AAG39354.1|  487|Homo sapiens amino acid transporter ...    29   6.6  

>BC010620-1|AAH10620.1|  487|Homo sapiens solute carrier family 38,
           member 1 protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 FVGFFIIFSLMPLALSIKCWNCRSSTD 189
           F+G  ++FSL+ + L I  W C SS+D
Sbjct: 458 FLGLGVLFSLVSIPLVIYDWACSSSSD 484


>AK074949-1|BAC11310.1|  487|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90468 fis, clone NT2RP3002342, highly similar to
           Solute carrier family 38, member 1. ).
          Length = 487

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 FVGFFIIFSLMPLALSIKCWNCRSSTD 189
           F+G  ++FSL+ + L I  W C SS+D
Sbjct: 458 FLGLGVLFSLVSIPLVIYDWACSSSSD 484


>AK074797-1|BAC11215.1|  413|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90316 fis, clone NT2RP2001495, weakly similar to
           Human transporter protein (g17) mRNA, complete cds. ).
          Length = 413

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 FVGFFIIFSLMPLALSIKCWNCRSSTD 189
           F+G  ++FSL+ + L I  W C SS+D
Sbjct: 384 FLGLGVLFSLVSIPLVIYDWACSSSSD 410


>AK074758-1|BAC11186.1|  326|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90277 fis, clone NT2RP1000300, weakly similar to
           Human transporter protein (g17) mRNA. ).
          Length = 326

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 FVGFFIIFSLMPLALSIKCWNCRSSTD 189
           F+G  ++FSL+ + L I  W C SS+D
Sbjct: 297 FLGLGVLFSLVSIPLVIYDWACSSSSD 323


>AK027825-1|BAB55394.1|  487|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14919 fis, clone PLACE1007243, weakly similar to
           UNC-47 PROTEIN. ).
          Length = 487

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 FVGFFIIFSLMPLALSIKCWNCRSSTD 189
           F+G  ++FSL+ + L I  W C SS+D
Sbjct: 458 FLGLGVLFSLVSIPLVIYDWACSSSSD 484


>AF271070-1|AAG39354.1|  487|Homo sapiens amino acid transporter
           system A1 protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 109 FVGFFIIFSLMPLALSIKCWNCRSSTD 189
           F+G  ++FSL+ + L I  W C SS+D
Sbjct: 458 FLGLGVLFSLVSIPLVIYDWACSSSSD 484


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,379,293
Number of Sequences: 237096
Number of extensions: 1378171
Number of successful extensions: 2803
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2803
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)