Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23e04
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 31 0.82
09_04_0197 - 15522167-15523524,15525416-15525683 30 1.4
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 2.5
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819 29 3.3
08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200... 29 4.4
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 4.4
05_07_0350 - 29457444-29457871,29458786-29461456 29 4.4
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 29 4.4
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 29 4.4
01_07_0260 - 42364769-42364777,42364884-42365354 29 4.4
01_05_0598 + 23548081-23548186,23548277-23549508,23549621-235496... 29 4.4
07_03_0544 + 19309026-19310105 28 5.8
07_01_1113 - 10292781-10293299 28 5.8
05_05_0137 - 22641577-22642119 28 5.8
05_01_0495 - 4136871-4136906,4137043-4137171,4137545-4137694,413... 28 5.8
03_06_0309 - 33039006-33039184,33039753-33039912 28 5.8
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 28 5.8
12_02_0121 + 13919496-13919734,13919821-13919982,13920102-13920534 28 7.7
11_04_0323 - 16380329-16380742 28 7.7
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 28 7.7
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 7.7
03_05_0292 + 22846273-22846377,22847161-22847823 28 7.7
03_01_0056 - 471338-471919,472013-472213 28 7.7
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 28 7.7
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 31.1 bits (67), Expect = 0.82
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +2
Query: 485 RESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR 664
R+ST GR+ G DG + A A H G+ AAR + + R G A P R
Sbjct: 28 RQSTRGRSTGSGDGEESEALAAAVHAGKISREDAAARRMARTKQTARKSTGGKAPRKPLR 87
>09_04_0197 - 15522167-15523524,15525416-15525683
Length = 541
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 427 GWTRKLKRPRTNGTKVGTKP 486
G++++L RPR+NGT + TKP
Sbjct: 416 GFSQRLTRPRSNGTYLSTKP 435
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 411 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 590
P L + +D+E+ E + G + K DAI EK +EL I K+ VLL+
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVLLK 96
>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
Length = 266
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 462 WNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 617
W G T A+ E E+T++W A E +Q + ++E +Y+ +L
Sbjct: 28 WRHGAPPTYDAVNSLFEAERTQEWPAGSLEETVQNAIKT--WEMELSYKAKL 77
>08_02_0665 +
19818500-19819013,19819169-19819260,19819435-19820056,
19820575-19820775,19821327-19821395,19821428-19821522,
19821608-19822153
Length = 712
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +2
Query: 500 GRNRG-REDGA-VARAGTGAPHPGQEGERAP---AARGRLQGEA---HVRLLRGEAASGL 655
G +G +EDG A G+G P PG G+R P A+ G +G A +LLR AA
Sbjct: 44 GAEKGVKEDGGGEAVEGSGGPPPGGGGDREPWSGASIGGRRGAADSSRRQLLRWHAAVQA 103
Query: 656 PA 661
PA
Sbjct: 104 PA 105
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 435 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE-AAYRE 611
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + RE
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 612 R 614
R
Sbjct: 397 R 397
>05_07_0350 - 29457444-29457871,29458786-29461456
Length = 1032
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = -1
Query: 238 GIKPSLTLPGSPLTGRAKVFWSCVATSEAEPRATSAVHAVCLL--APERKATRDNIIYRI 65
G P T PGS GRA V W A A AV A ER+ R R
Sbjct: 637 GPAPGTTTPGSGGDGRAPVMWLAAALGLLACSVAFAAAAVATTRSAIERR-RRSGWQMRA 695
Query: 64 FYKLFPKCED 35
F K+ CED
Sbjct: 696 FQKVRFGCED 705
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 299 CGSGNIPVQQGNLCNGARILLRTVTAGH 382
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 485 RESTGGRNRGREDGAVARAGTGAPHPGQEGE-RAPAARGRLQGEAHVR 625
R G RG +DGA AR G G +EG+ RGR + EA+ R
Sbjct: 16 RAERSGAPRGDDDGADARGGGGEEEEEEEGDGDGGDVRGR-RYEAYTR 62
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 527 AVARAGTGAPHPGQEGERAPAA 592
A+A G GA G+EGE+ PAA
Sbjct: 132 AIAGCGAGAVDAGEEGEKRPAA 153
>01_05_0598 +
23548081-23548186,23548277-23549508,23549621-23549652,
23549796-23550039
Length = 537
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 497 GGRNRGREDGAVARAGTGAPHPGQE----GERAPAARGRLQGEAHVRLL 631
GG GR D A G GA + G G+ PAA GR G+A ++++
Sbjct: 340 GGSAAGRNDSA--GDGAGAKNNGSRMTVAGDGKPAAAGRFHGDAVLKIM 386
>07_03_0544 + 19309026-19310105
Length = 359
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 491 STGGRNRGREDGAVARAGTGAPHPGQEGERAP 586
+ G G GA A AG GAP P E R P
Sbjct: 21 AAGRSGGGGGGGAAAAAGAGAPDPRAEALRCP 52
>07_01_1113 - 10292781-10293299
Length = 172
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 150 SASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLA 311
S+ D AT + PG +RL + + + H + GP+ G+GL+
Sbjct: 91 SSVDAATKGNPPRSARTTSAPGSLRLPEVAQRVVELLHHRHWWFGPWALGLGLS 144
>05_05_0137 - 22641577-22642119
Length = 180
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 ESTGGRNRGRE-----DGAVARAGTGAPHPGQEGERAPAARGRL 604
E TGG++ GRE G + A H G+ RA RGR+
Sbjct: 7 EGTGGKHHGREVAMATRGRIPHAALAISHRGKSCVRARGRRGRI 50
>05_01_0495 -
4136871-4136906,4137043-4137171,4137545-4137694,
4137782-4137847,4138124-4138168,4139022-4139102,
4139202-4139283,4139571-4139642,4140473-4140573,
4140690-4140806,4140929-4141249
Length = 399
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 233 YS*RMVPILPLENWCDGS 286
Y+ RM PI+P+ENW GS
Sbjct: 213 YNPRMDPIIPVENWRKGS 230
>03_06_0309 - 33039006-33039184,33039753-33039912
Length = 112
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 456 SRSLQLPCPTKQPILVRISREPHTP*PAVTVRSNIR 349
+RS+ LP P +P + PH P AV R +R
Sbjct: 11 ARSMALPIPLARPPPLATVARPHPPQDAVQARDGVR 46
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 102 SGASKQTACTALVARGSASDVATHDQKTFAR 194
+ A K AC ALV+RG A+D + + AR
Sbjct: 630 AAAGKLEACRALVSRGGAADAGSETALSVAR 660
>12_02_0121 + 13919496-13919734,13919821-13919982,13920102-13920534
Length = 277
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 491 STGGRNRGRED-GAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGE 640
S GGR R E+ VA A P P + G + A + R + E R +GE
Sbjct: 28 SIGGRGRAEEELMVVAIADNVGPSPPRSGRKRGAGQRRRRTEEESRRPQGE 78
>11_04_0323 - 16380329-16380742
Length = 137
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 479 PNRESTGGRNRGREDG---AVARAGTGAPHPGQEGERAPAARGRLQGEA 616
P+ +GG + GR G + R+G + G +G R R R GEA
Sbjct: 29 PSSPRSGGGSAGRAGGGGGSAGRSGGSSARLGDKGRRRQGGRWRRLGEA 77
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +2
Query: 497 GGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPARE 667
GGR RGR G R TG G E E G+ + A + GE L RE
Sbjct: 28 GGRGRGRGRGVRWRCATGGGAGGGEVEEG-EGEGKREAAAWLSSAVGEKVDELLLRE 83
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 482 NRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARG 598
N GGR GR DG+ R G G+R RG
Sbjct: 668 NSSGRGGRRGGRGDGSRGRGDRGRGRGFGRGDRGHGGRG 706
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +2
Query: 497 GGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEA 616
GGR G DG AR G G G G R GR GEA
Sbjct: 60 GGRGDGARDGGGARGGGGRGARGGGGAR--GGGGRHGGEA 97
>03_01_0056 - 471338-471919,472013-472213
Length = 260
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 255 FFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHE 353
+F + V YT GV A YL + E+Y +H+
Sbjct: 47 YFGASIKVPSGYTAGVNTAFYLSNNELYPGQHD 79
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 450 TENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAY 629
T + E + Q + L+ EG + R +E L + ++E L+ Y E L Y
Sbjct: 386 TPEQLKEKKKQIL--LKTTTEGRMRAKQRRAEEEALREKQEEERRLENPELYLEELRARY 443
Query: 630 SEVKRRLD 653
SE+ R+D
Sbjct: 444 SELSDRVD 451
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,042,030
Number of Sequences: 37544
Number of extensions: 422335
Number of successful extensions: 1687
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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