Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23d21
(555 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ499597-1|ABF54968.1| 299|Homo sapiens HBeAg-binding protein 2... 110 3e-24
BC001898-1|AAH01898.1| 247|Homo sapiens mannose-P-dolichol util... 110 3e-24
AF059752-1|AAG43121.1| 211|Homo sapiens My008 protein protein. 110 3e-24
AK055923-1|BAB71046.1| 121|Homo sapiens protein ( Homo sapiens ... 91 3e-18
AK027742-1|BAB55334.1| 126|Homo sapiens protein ( Homo sapiens ... 46 7e-05
BC027625-1|AAH27625.1| 202|Homo sapiens PQ loop repeat containi... 38 0.031
AK001091-1|BAE46613.1| 202|Homo sapiens protein ( Homo sapiens ... 38 0.031
AC018463-1|AAX93048.1| 202|Homo sapiens unknown protein. 38 0.031
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 4.7
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 4.7
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 4.7
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 4.7
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 4.7
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 4.7
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 4.7
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 4.7
>DQ499597-1|ABF54968.1| 299|Homo sapiens HBeAg-binding protein 2
binding protein A protein.
Length = 299
Score = 110 bits (265), Expect = 3e-24
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +2
Query: 161 LKGLLLGVL-SQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQS 337
LK LL+ +L +KCY++ F++++ L VPC K PQ+FKIL +
Sbjct: 9 LKRLLVPILLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGA 68
Query: 338 KSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPM 517
KSAEG+++ V LEL A+T YS FPFS+WGE FL +QT I LV+HY G +
Sbjct: 69 KSAEGLSLQSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTV 128
Query: 518 KGGIFLSVY 544
KG FL+ Y
Sbjct: 129 KGVAFLACY 137
>BC001898-1|AAH01898.1| 247|Homo sapiens mannose-P-dolichol
utilization defect 1 protein.
Length = 247
Score = 110 bits (265), Expect = 3e-24
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +2
Query: 161 LKGLLLGVL-SQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQS 337
LK LL+ +L +KCY++ F++++ L VPC K PQ+FKIL +
Sbjct: 9 LKRLLVPILLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGA 68
Query: 338 KSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPM 517
KSAEG+++ V LEL A+T YS FPFS+WGE FL +QT I LV+HY G +
Sbjct: 69 KSAEGLSLQSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTV 128
Query: 518 KGGIFLSVY 544
KG FL+ Y
Sbjct: 129 KGVAFLACY 137
>AF059752-1|AAG43121.1| 211|Homo sapiens My008 protein protein.
Length = 211
Score = 110 bits (265), Expect = 3e-24
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +2
Query: 161 LKGLLLGVL-SQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQS 337
LK LL+ +L +KCY++ F++++ L VPC K PQ+FKIL +
Sbjct: 9 LKRLLVPILLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGA 68
Query: 338 KSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPM 517
KSAEG+++ V LEL A+T YS FPFS+WGE FL +QT I LV+HY G +
Sbjct: 69 KSAEGLSLQSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTV 128
Query: 518 KGGIFLSVY 544
KG FL+ Y
Sbjct: 129 KGVAFLACY 137
>AK055923-1|BAB71046.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ31361 fis, clone MESAN2008460, highly similar to
Homo sapiens SL15 protein mRNA. ).
Length = 121
Score = 90.6 bits (215), Expect = 3e-18
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 161 LKGLLLGVL-SQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQS 337
LK LL+ +L +KCY++ F++++ L VPC K PQ+FKIL +
Sbjct: 9 LKRLLVPILLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGA 68
Query: 338 KSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI 481
KSAEG+++ V LEL A+T YS FPFS+WGE FL +QT I
Sbjct: 69 KSAEGLSLQSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITI 116
>AK027742-1|BAB55334.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ14836 fis, clone OVARC1001702. ).
Length = 126
Score = 46.4 bits (105), Expect = 7e-05
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 161 LKGLLLGVL-SQKCYNEYFLKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQS 337
LK LL+ +L +KCY++ F++++ L VPC K PQ+FKIL +
Sbjct: 9 LKRLLVPILLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGA 68
Query: 338 KSAEGI 355
KSA G+
Sbjct: 69 KSAAGL 74
>BC027625-1|AAH27625.1| 202|Homo sapiens PQ loop repeat containing
3 protein.
Length = 202
Score = 37.5 bits (83), Expect = 0.031
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 311 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 490
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 491 VLHYGGAPMKGGIFLSV 541
+ H+ G + +++V
Sbjct: 83 IFHFNGNVKQATPYIAV 99
>AK001091-1|BAE46613.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ10229 fis, clone HEMBB1000136. ).
Length = 202
Score = 37.5 bits (83), Expect = 0.031
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 311 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 490
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 491 VLHYGGAPMKGGIFLSV 541
+ H+ G + +++V
Sbjct: 83 IFHFNGNVKQATPYIAV 99
>AC018463-1|AAX93048.1| 202|Homo sapiens unknown protein.
Length = 202
Score = 37.5 bits (83), Expect = 0.031
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 311 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 490
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 491 VLHYGGAPMKGGIFLSV 541
+ H+ G + +++V
Sbjct: 83 IFHFNGNVKQATPYIAV 99
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 343 CRRNQY--LWSLSGVVCYHCELCL 408
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,572,251
Number of Sequences: 237096
Number of extensions: 1861197
Number of successful extensions: 6642
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6635
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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