Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23d14
(555 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457252-1|CAG33533.1| 430|Homo sapiens FLJ10276 protein. 61 3e-09
BC028381-1|AAH28381.1| 430|Homo sapiens BSDC1 protein protein. 61 3e-09
BC026322-1|AAH26322.1| 428|Homo sapiens BSDC1 protein protein. 61 3e-09
AL109945-5|CAI22889.1| 430|Homo sapiens BSD domain containing 1... 61 3e-09
AK021440-1|BAB13825.1| 173|Homo sapiens protein ( Homo sapiens ... 61 3e-09
AK001138-1|BAA91517.1| 430|Homo sapiens protein ( Homo sapiens ... 61 3e-09
AL109945-6|CAI22890.1| 474|Homo sapiens BSD domain containing 1... 45 2e-04
BC065295-1|AAH65295.1| 208|Homo sapiens CCDC25 protein protein. 31 2.7
BC054039-1|AAH54039.1| 177|Homo sapiens CCDC25 protein protein. 31 2.7
BC049197-1|AAH49197.2| 208|Homo sapiens coiled-coil domain cont... 31 2.7
AK027900-1|BAB55442.1| 208|Homo sapiens protein ( Homo sapiens ... 31 2.7
>CR457252-1|CAG33533.1| 430|Homo sapiens FLJ10276 protein.
Length = 430
Score = 60.9 bits (141), Expect = 3e-09
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPE 414
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSS 68
Query: 415 SPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
MKK +S F+G +S P PD D +VI G
Sbjct: 69 GATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 106
>BC028381-1|AAH28381.1| 430|Homo sapiens BSDC1 protein protein.
Length = 430
Score = 60.9 bits (141), Expect = 3e-09
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPE 414
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSS 68
Query: 415 SPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
MKK +S F+G +S P PD D +VI G
Sbjct: 69 GATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 106
>BC026322-1|AAH26322.1| 428|Homo sapiens BSDC1 protein protein.
Length = 428
Score = 60.9 bits (141), Expect = 3e-09
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPE 414
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSS 68
Query: 415 SPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
MKK +S F+G +S P PD D +VI G
Sbjct: 69 GATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 106
>AL109945-5|CAI22889.1| 430|Homo sapiens BSD domain containing 1
protein.
Length = 430
Score = 60.9 bits (141), Expect = 3e-09
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPE 414
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSS 68
Query: 415 SPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
MKK +S F+G +S P PD D +VI G
Sbjct: 69 GATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 106
>AK021440-1|BAB13825.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ11378 fis, clone HEMBA1000456. ).
Length = 173
Score = 60.9 bits (141), Expect = 3e-09
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPE 414
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSS 68
Query: 415 SPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
MKK +S F+G +S P PD D +VI G
Sbjct: 69 GATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 106
>AK001138-1|BAA91517.1| 430|Homo sapiens protein ( Homo sapiens
cDNA FLJ10276 fis, clone HEMBB1001182. ).
Length = 430
Score = 60.9 bits (141), Expect = 3e-09
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPE 414
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSS 68
Query: 415 SPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
MKK +S F+G +S P PD D +VI G
Sbjct: 69 GATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 106
>AL109945-6|CAI22890.1| 474|Homo sapiens BSD domain containing 1
protein.
Length = 474
Score = 45.2 bits (102), Expect = 2e-04
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 21/115 (18%)
Frame = +1
Query: 247 WWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDV-- 408
WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L +
Sbjct: 9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLAIAACS 68
Query: 409 ------------PESPANA---MKKSISTFIGQVSTVLNPEPDDEDDTEVILSSG 528
E + A MKK +S F+G +S P PD D +VI G
Sbjct: 69 RGACFLCPFSIQTEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMG 123
>BC065295-1|AAH65295.1| 208|Homo sapiens CCDC25 protein protein.
Length = 208
Score = 31.1 bits (67), Expect = 2.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 DSWLSSAKTKSAEVYTMVKK--DLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPAN 426
D W K SA VY + K ++++I V + +H+ S K ++V +P +
Sbjct: 37 DIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWS 96
Query: 427 AMKKSISTFIGQV 465
+KK+ +GQ+
Sbjct: 97 NLKKTADMDVGQI 109
>BC054039-1|AAH54039.1| 177|Homo sapiens CCDC25 protein protein.
Length = 177
Score = 31.1 bits (67), Expect = 2.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 DSWLSSAKTKSAEVYTMVKK--DLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPAN 426
D W K SA VY + K ++++I V + +H+ S K ++V +P +
Sbjct: 37 DIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWS 96
Query: 427 AMKKSISTFIGQV 465
+KK+ +GQ+
Sbjct: 97 NLKKTADMDVGQI 109
>BC049197-1|AAH49197.2| 208|Homo sapiens coiled-coil domain
containing 25 protein.
Length = 208
Score = 31.1 bits (67), Expect = 2.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 DSWLSSAKTKSAEVYTMVKK--DLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPAN 426
D W K SA VY + K ++++I V + +H+ S K ++V +P +
Sbjct: 37 DIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWS 96
Query: 427 AMKKSISTFIGQV 465
+KK+ +GQ+
Sbjct: 97 NLKKTADMDVGQI 109
>AK027900-1|BAB55442.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ14994 fis, clone Y79AA1002125. ).
Length = 208
Score = 31.1 bits (67), Expect = 2.7
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 DSWLSSAKTKSAEVYTMVKK--DLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPAN 426
D W K SA VY + K ++++I V + +H+ S K ++V +P +
Sbjct: 37 DIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWS 96
Query: 427 AMKKSISTFIGQV 465
+KK+ +GQ+
Sbjct: 97 NLKKTADMDVGQI 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,614,404
Number of Sequences: 237096
Number of extensions: 1400568
Number of successful extensions: 4839
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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