Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23d12
         (608 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0179 - 14952398-14952511,14953333-14953356,14953543-149536...    28   5.0  
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159...    28   5.0  
11_06_0676 + 26152192-26152367,26152669-26152708,26152857-261529...    27   8.8  
07_01_0057 + 431084-431105,431149-431297,431380-431526,431622-43...    27   8.8  
01_01_0766 - 5928283-5929092                                           27   8.8  

>12_02_0179 -
           14952398-14952511,14953333-14953356,14953543-14953670,
           14953765-14953891,14953930-14954013,14954245-14954397,
           14954478-14954579,14955036-14955128,14955289-14955350,
           14955395-14955522,14957053-14957291,14958040-14958471,
           14958774-14958912,14960564-14960883
          Length = 714

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +1

Query: 160 KGDRDLGKFIRDRVKFVFESPEKHNLDSEYCNRQYQALNRLADNHYRNKYKRT---KSST 330
           + D  + K     V  VF    + N++   C++ +QAL + +  H   + K T   +S+ 
Sbjct: 104 RSDSAVFKLAEKDVGCVFAKTGEVNIEKIKCSKYFQALLQKSKGHAAEQMKTTDCQESTI 163

Query: 331 ATGLSTEECNLILSNEVLA 387
             G   EE +  + NE L+
Sbjct: 164 EEGPHVEENSTDMENEKLS 182


>07_01_0214 +
           1595917-1596526,1597127-1597140,1598414-1598743,
           1598853-1598963,1599113-1599269,1603366-1603619,
           1603762-1603960,1604341-1604498
          Length = 610

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 474 FRRTYCTEYVKYKDHTPVMLNEALKYLKPQDGELYVDXTFGXGGH 608
           F   YC    KY++     ++EA+++LK  + +L    T   G H
Sbjct: 354 FMEAYCNMLAKYREELTRPIDEAMEFLKRVESQL---DTIAGGAH 395


>11_06_0676 +
           26152192-26152367,26152669-26152708,26152857-26152966,
           26153886-26153934,26154157-26154206,26154606-26155150,
           26155583-26155743,26156231-26156440,26156525-26156690,
           26156765-26156869,26157465-26157760
          Length = 635

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/51 (21%), Positives = 26/51 (50%)
 Frame = +1

Query: 208 VFESPEKHNLDSEYCNRQYQALNRLADNHYRNKYKRTKSSTATGLSTEECN 360
           ++ S +  N  ++  + + + +     NH+ N+  R+K++  +   TEE N
Sbjct: 107 IYRSLQSLNKRTDILSHEVEQIKHSNSNHHANQQYRSKANQESAAITEEVN 157


>07_01_0057 +
           431084-431105,431149-431297,431380-431526,431622-431752,
           431791-431894,432949-433128,433481-433581,434030-434185,
           434679-434731,434818-434875,435162-435282,436010-436215
          Length = 475

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 289 NHYRNKYKRTKSSTATGLSTEECNL-ILSNEVLAYLKEQNKGFFRKF 426
           N +RN+    KSS A  +S+  C+L +LS++   +L     G  + F
Sbjct: 325 NRWRNQADNAKSSRAISMSSAVCSLVVLSSDEHYFLGSSMDGSIKLF 371


>01_01_0766 - 5928283-5929092
          Length = 269

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 213 KNKFNSIPDELTKVSVSFSYIQWPFSYEFDKFLILSCHSYI 91
           K K N I D+ +KVS++   I + F+Y+F + L +  H  +
Sbjct: 209 KKKLNMILDQ-SKVSINNQGIGYDFAYDFAESLRIGTHEIL 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,302,906
Number of Sequences: 37544
Number of extensions: 216989
Number of successful extensions: 525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)