Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23d12
         (608 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006007-1|AAH06007.1|  126|Homo sapiens chromosome 6 open readi...    97   3e-20
AY568085-1|AAS68365.1|  126|Homo sapiens breast cancer associate...    97   3e-20
AL139044-2|CAI16458.1|  126|Homo sapiens protein ( Human DNA seq...    97   3e-20
AL139044-3|CAI16457.1|  101|Homo sapiens protein ( phate recepto...    57   6e-08
BC030997-1|AAH30997.1|  212|Homo sapiens METT5D1 protein protein.      44   4e-04
AK091298-1|BAC03631.1|  273|Homo sapiens protein ( Homo sapiens ...    44   4e-04

>BC006007-1|AAH06007.1|  126|Homo sapiens chromosome 6 open reading
           frame 125 protein.
          Length = 126

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 45/107 (42%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +1

Query: 106 TQYKKFIKLIAKWPLDVTKGDRDLGKFIRDRVKFVFESPEKHNL-DSEYCNRQYQALNRL 282
           ++Y++F+KL  +WP+D TK  RDLG ++R RV   F   E   + + E C++ Y++L RL
Sbjct: 4   SRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGENTQVAEPEACDQMYESLARL 63

Query: 283 ADNHYRNKYKRTKSSTATGLSTEECNLILSNEVLAYLKEQNKGFFRK 423
             N+Y++KY R + ++ +GLS EE  LILS + L  LKE +KG ++K
Sbjct: 64  HSNYYKHKYPRPRDTSFSGLSLEEYKLILSTDTLEELKEIDKGMWKK 110


>AY568085-1|AAS68365.1|  126|Homo sapiens breast cancer associated
           protein SGA-81M protein.
          Length = 126

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 45/107 (42%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +1

Query: 106 TQYKKFIKLIAKWPLDVTKGDRDLGKFIRDRVKFVFESPEKHNL-DSEYCNRQYQALNRL 282
           ++Y++F+KL  +WP+D TK  RDLG ++R RV   F   E   + + E C++ Y++L RL
Sbjct: 4   SRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGENTQVAEPEACDQMYESLARL 63

Query: 283 ADNHYRNKYKRTKSSTATGLSTEECNLILSNEVLAYLKEQNKGFFRK 423
             N+Y++KY R + ++ +GLS EE  LILS + L  LKE +KG ++K
Sbjct: 64  HSNYYKHKYPRPRDTSFSGLSLEEYKLILSTDTLEELKEIDKGMWKK 110


>AL139044-2|CAI16458.1|  126|Homo sapiens protein ( Human DNA
           sequence from clone RP11-6B20 on chromosome 6 Contains
           theITPR3 gene for inositol 1,4,5-triphosphate receptor
           type 3, a novel nase, ininositol 1,4,5-triphosphate
           receptor, type 3).
          Length = 126

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 45/107 (42%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +1

Query: 106 TQYKKFIKLIAKWPLDVTKGDRDLGKFIRDRVKFVFESPEKHNL-DSEYCNRQYQALNRL 282
           ++Y++F+KL  +WP+D TK  RDLG ++R RV   F   E   + + E C++ Y++L RL
Sbjct: 4   SRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGENTQVAEPEACDQMYESLARL 63

Query: 283 ADNHYRNKYKRTKSSTATGLSTEECNLILSNEVLAYLKEQNKGFFRK 423
             N+Y++KY R + ++ +GLS EE  LILS + L  LKE +KG ++K
Sbjct: 64  HSNYYKHKYPRPRDTSFSGLSLEEYKLILSTDTLEELKEIDKGMWKK 110


>AL139044-3|CAI16457.1|  101|Homo sapiens protein ( phate receptor
           type 3, a novel nase, ininositol 1,4,5-triphosphate
           receptor, type 3).).
          Length = 101

 Score = 56.8 bits (131), Expect = 6e-08
 Identities = 36/106 (33%), Positives = 54/106 (50%)
 Frame = +1

Query: 106 TQYKKFIKLIAKWPLDVTKGDRDLGKFIRDRVKFVFESPEKHNLDSEYCNRQYQALNRLA 285
           ++Y++F+KL  +WP+D TK  RDLG ++R RV   F   E                    
Sbjct: 4   SRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGE-------------------- 43

Query: 286 DNHYRNKYKRTKSSTATGLSTEECNLILSNEVLAYLKEQNKGFFRK 423
                 +Y R + ++ +GLS EE  LILS + L  LKE +KG ++K
Sbjct: 44  ----NTQYPRPRDTSFSGLSLEEYKLILSTDTLEELKEIDKGMWKK 85


>BC030997-1|AAH30997.1|  212|Homo sapiens METT5D1 protein protein.
          Length = 212

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 510 KDHTPVMLNEALKYLKPQDGELYVDXTFGXGGH 608
           K H PVM++E +  L PQ G++++D TFG GGH
Sbjct: 3   KLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGH 35


>AK091298-1|BAC03631.1|  273|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33979 fis, clone DFNES2004371. ).
          Length = 273

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 510 KDHTPVMLNEALKYLKPQDGELYVDXTFGXGGH 608
           K H PVM++E +  L PQ G++++D TFG GGH
Sbjct: 70  KLHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGH 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,205,502
Number of Sequences: 237096
Number of extensions: 1226803
Number of successful extensions: 6096
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6093
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)