Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23d10
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for ...    31   2.9  
BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis vi...    31   2.9  
BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis vi...    31   2.9  
AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis vi...    31   2.9  
AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B v...    31   2.9  

>X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for
           B-myb gene. ).
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B
           variant protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,336,228
Number of Sequences: 237096
Number of extensions: 1453137
Number of successful extensions: 3374
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3374
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)