Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23d08
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 1.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 1.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.9
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 7.8
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.8
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 253 PDLLSYFAIVENESKARVKFNLM 321
P+LL YFA + K + + NL+
Sbjct: 830 PNLLRYFASIATNPKEQAQLNLL 852
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.4 bits (48), Expect = 1.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 233 QESRCWFISHSYFV 192
+++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 506 STTKNSTIINKNYKF 550
S+ N+TI N NYK+
Sbjct: 82 SSLSNNTIHNNNYKY 96
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 506 STTKNSTIINKNYKF 550
S+ N+TI N NYK+
Sbjct: 82 SSLSNNTIHNNNYKY 96
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 506 STTKNSTIINKNYKF 550
S+ N+TI N NYK+
Sbjct: 83 SSLSNNTIHNNNYKY 97
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 506 STTKNSTIINKNYKF 550
S+ N+TI N NYK+
Sbjct: 83 SSLSNNTIHNNNYKY 97
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 506 STTKNSTIINKNYKF 550
S+ N+TI N NYK+
Sbjct: 83 SSLSNNTIHNNNYKY 97
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 506 STTKNSTIINKNYKF 550
S+ N+TI N NYK+
Sbjct: 83 SSLSNNTIHNNNYKY 97
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 337 PCGPPPEKPED*TLRF 384
PC PP P++ T+ F
Sbjct: 313 PCTQPPSAPQNLTVNF 328
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 7.8
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 65 NFRVYTISTSILPLKIKWVKDTTFTVNLNIYRANI*AQATPTLQNMNGL 211
+FR + +STSIL K ++T + + + RA ++ ++ + NG+
Sbjct: 398 SFREFAVSTSILGDKKTAEENTDYFMPIGRPRAKDYGHSSGSVIDRNGV 446
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 7.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +3
Query: 591 VKCLTILFLYTNLF 632
+ C+ ++FLY N+F
Sbjct: 354 IPCIIMVFLYYNIF 367
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 80 TISTSILPLKIKWVKD 127
+++ LPL I W+KD
Sbjct: 633 SVTRGDLPLSISWLKD 648
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,285
Number of Sequences: 438
Number of extensions: 3098
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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