Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23d06
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for ...    31   2.9  
BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis vi...    31   2.9  
BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis vi...    31   2.9  
AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis vi...    31   2.9  
AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B v...    31   2.9  
AJ549246-1|CAD70489.1|  105|Homo sapiens putative DYT3 protein p...    30   6.8  
AL158069-1|CAD18889.1|  472|Homo sapiens transmembrane protein 2...    29   9.0  
AF087142-1|AAC62086.1|  473|Homo sapiens TED protein protein.          29   9.0  

>X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for
           B-myb gene. ).
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B
           variant protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   LRAVTTQTTSVSFLRLRKRNSLTICSRDVAALPYIPTRAVNF 130
           L  VT  +TS+SFL     NSLT  S  V  LP+ P++ +NF
Sbjct: 420 LSPVTENSTSLSFLD--SCNSLTPKSTPVKTLPFSPSQFLNF 459


>AJ549246-1|CAD70489.1|  105|Homo sapiens putative DYT3 protein
           protein.
          Length = 105

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = +1

Query: 415 YGMVLLCAGALINWLGLAEDYAEPVRYVGVACIVAGALLICAAMCCWLQSPARQP 579
           +G +LL  G     LG A      V   G    V    L    +CCW   PAR P
Sbjct: 2   HGALLLLRGLGFLLLGRARGDVVVVAVAGRVLTVLVVALPPRTLCCWTSPPARPP 56


>AL158069-1|CAD18889.1|  472|Homo sapiens transmembrane protein 28
           protein.
          Length = 472

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 517 AGALLICAAMCCWLQSPARQP 579
           A AL IC   CCW   P+ +P
Sbjct: 13  AAALTICCCCCCWAPRPSDKP 33


>AF087142-1|AAC62086.1|  473|Homo sapiens TED protein protein.
          Length = 473

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 517 AGALLICAAMCCWLQSPARQP 579
           A AL IC   CCW   P+ +P
Sbjct: 13  AAALTICCCCCCWAPRPSDKP 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,203,854
Number of Sequences: 237096
Number of extensions: 1477653
Number of successful extensions: 3444
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3444
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)