Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23d04
(588 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095084-1|AAM11412.1| 133|Drosophila melanogaster RE49709p pro... 188 6e-48
AY071722-1|AAL49344.1| 133|Drosophila melanogaster RH38554p pro... 188 6e-48
AE014297-4356|AAF56878.1| 133|Drosophila melanogaster CG1458-PA... 188 6e-48
X91245-1|CAA62627.1| 495|Drosophila melanogaster muscle LIM pro... 33 0.38
BT003202-1|AAO24957.1| 495|Drosophila melanogaster RE40142p pro... 33 0.38
AF090832-1|AAC61591.1| 495|Drosophila melanogaster muscle LIM p... 33 0.38
AE014297-561|AAF54064.1| 495|Drosophila melanogaster CG1019-PB,... 33 0.38
AE014297-560|AAF54063.1| 495|Drosophila melanogaster CG1019-PA,... 33 0.38
AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein... 31 0.88
AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA... 31 0.88
BT011450-1|AAR99108.1| 228|Drosophila melanogaster RE41058p pro... 30 2.7
AE014134-3384|AAN11115.1| 381|Drosophila melanogaster CG31622-P... 30 2.7
AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p pro... 29 3.5
AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA ... 29 3.5
AY071376-1|AAL48998.1| 136|Drosophila melanogaster RE40412p pro... 28 8.2
AE013599-224|AAM70829.2| 136|Drosophila melanogaster CG3420-PA ... 28 8.2
>AY095084-1|AAM11412.1| 133|Drosophila melanogaster RE49709p
protein.
Length = 133
Score = 188 bits (457), Expect = 6e-48
Identities = 82/132 (62%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Frame = +1
Query: 31 MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 210
M +S+LVK ++PNYLSSLP+PDS+GGWF+L KDWLALIPPTVVV G+ Y +Y A
Sbjct: 1 MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60
Query: 211 REAG-----SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNK 375
A SG+ N IRK+ KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK
Sbjct: 61 ARASCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNK 120
Query: 376 ETGDNTGPVVVR 411
+TGDN GP+V++
Sbjct: 121 QTGDNVGPIVIK 132
>AY071722-1|AAL49344.1| 133|Drosophila melanogaster RH38554p
protein.
Length = 133
Score = 188 bits (457), Expect = 6e-48
Identities = 82/132 (62%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Frame = +1
Query: 31 MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 210
M +S+LVK ++PNYLSSLP+PDS+GGWF+L KDWLALIPPTVVV G+ Y +Y A
Sbjct: 1 MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60
Query: 211 REAG-----SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNK 375
A SG+ N IRK+ KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK
Sbjct: 61 ARASCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNK 120
Query: 376 ETGDNTGPVVVR 411
+TGDN GP+V++
Sbjct: 121 QTGDNVGPIVIK 132
>AE014297-4356|AAF56878.1| 133|Drosophila melanogaster CG1458-PA
protein.
Length = 133
Score = 188 bits (457), Expect = 6e-48
Identities = 82/132 (62%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Frame = +1
Query: 31 MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKA 210
M +S+LVK ++PNYLSSLP+PDS+GGWF+L KDWLALIPPTVVV G+ Y +Y A
Sbjct: 1 MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLGYTAYLAYCPA 60
Query: 211 REAG-----SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNK 375
A SG+ N IRK+ KVVD ID+EDI EKA+ CRCW++KNWPYCDGSHG HNK
Sbjct: 61 ARASCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFCRCWKTKNWPYCDGSHGEHNK 120
Query: 376 ETGDNTGPVVVR 411
+TGDN GP+V++
Sbjct: 121 QTGDNVGPIVIK 132
>X91245-1|CAA62627.1| 495|Drosophila melanogaster muscle LIM
protein protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 169 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 348
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 349 DGSHG 363
G HG
Sbjct: 280 -GPHG 283
>BT003202-1|AAO24957.1| 495|Drosophila melanogaster RE40142p
protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 169 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 348
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 349 DGSHG 363
G HG
Sbjct: 280 -GPHG 283
>AF090832-1|AAC61591.1| 495|Drosophila melanogaster muscle LIM
protein at 84B protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 169 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 348
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 349 DGSHG 363
G HG
Sbjct: 280 -GPHG 283
>AE014297-561|AAF54064.1| 495|Drosophila melanogaster CG1019-PB,
isoform B protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 169 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 348
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 349 DGSHG 363
G HG
Sbjct: 280 -GPHG 283
>AE014297-560|AAF54063.1| 495|Drosophila melanogaster CG1019-PA,
isoform A protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 169 GGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYC 348
GG+ Y + Q + K RE N C KD +K +D I+ D ++ CR K W
Sbjct: 226 GGVVYAAEQKLSKGREWHKKCFN-C--KDCHKTLDSINASDGPDRDVYCRTCYGKKW--- 279
Query: 349 DGSHG 363
G HG
Sbjct: 280 -GPHG 283
>AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein
protein.
Length = 1641
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 315 AKGCLLSYILNVNKVY-NFINVLPDTRVYLTTASFSGFFYCLVRVVRYT 172
A G L YIL ++Y N I + D YLT SF YC++ + T
Sbjct: 636 APGLLFDYILLQIQIYDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLT 684
>AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA
protein.
Length = 1641
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 315 AKGCLLSYILNVNKVY-NFINVLPDTRVYLTTASFSGFFYCLVRVVRYT 172
A G L YIL ++Y N I + D YLT SF YC++ + T
Sbjct: 636 APGLLFDYILLQIQIYDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLT 684
>BT011450-1|AAR99108.1| 228|Drosophila melanogaster RE41058p
protein.
Length = 228
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 478 FYIIFSKTTLAIYFFVFSWLVCV*QRLGRCCRQ 380
F+I F+ + + F+ +W+ C+ LG+CC++
Sbjct: 28 FFICFAAVIVGVSVFLGTWIFCI---LGKCCQR 57
>AE014134-3384|AAN11115.1| 381|Drosophila melanogaster CG31622-PC,
isoform C protein.
Length = 381
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -1
Query: 312 KGCLLSYILNVNKVYNFINVLPDTRVYLTTASFSGFFYCLVRVVRYTANYN 160
K C+ ++ + ++++ I L YL T+ G ++C+V +VR ++N
Sbjct: 146 KTCIFEWLTDASRLF-VITSLGFPLRYLVTSFTMGTYFCMVHIVRLVLDWN 195
>AY128477-1|AAM75070.1| 939|Drosophila melanogaster RE39339p
protein.
Length = 939
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YILLLLPDNKKSQRSWQWSNKPLYQEG 254
Y+ LLL D+ W W +P+Y++G
Sbjct: 802 YVQLLLNDHDHEVDMWCWGGEPIYRDG 828
>AE014298-628|AAF45943.3| 939|Drosophila melanogaster CG3626-PA
protein.
Length = 939
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YILLLLPDNKKSQRSWQWSNKPLYQEG 254
Y+ LLL D+ W W +P+Y++G
Sbjct: 802 YVQLLLNDHDHEVDMWCWGGEPIYRDG 828
>AY071376-1|AAL48998.1| 136|Drosophila melanogaster RE40412p
protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 307 SLCRCWRSKNWPYCDGSH 360
S C C +SK+ P CDG H
Sbjct: 69 SWCLCGKSKSQPLCDGMH 86
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 310 LCRCWRSKNWPYCDGSH-GPH 369
LC C ++ + P+CDG+H PH
Sbjct: 110 LCNCKQTTHRPFCDGTHKQPH 130
>AE013599-224|AAM70829.2| 136|Drosophila melanogaster CG3420-PA
protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 307 SLCRCWRSKNWPYCDGSH 360
S C C +SK+ P CDG H
Sbjct: 69 SWCLCGKSKSQPLCDGMH 86
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 310 LCRCWRSKNWPYCDGSH-GPH 369
LC C ++ + P+CDG+H PH
Sbjct: 110 LCNCKQTTHRPFCDGTHKQPH 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,286,487
Number of Sequences: 53049
Number of extensions: 527355
Number of successful extensions: 1497
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -