Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23d03
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038842-1|AAH38842.1| 164|Homo sapiens C1orf91 protein protein. 61 3e-09
BC004885-1|AAH04885.1| 140|Homo sapiens chromosome 1 open readi... 61 3e-09
AY358586-1|AAQ88949.1| 180|Homo sapiens AASL548 protein. 61 3e-09
AL049795-9|CAI22060.1| 180|Homo sapiens chromosome 1 open readi... 61 3e-09
AL049795-8|CAI22059.1| 140|Homo sapiens chromosome 1 open readi... 61 3e-09
AL049795-7|CAM12880.1| 164|Homo sapiens chromosome 1 open readi... 61 3e-09
AF258548-1|AAG23751.1| 164|Homo sapiens PP1065 protein. 61 3e-09
U77665-1|AAC51143.1| 268|Homo sapiens RNaseP protein P30 protein. 35 0.23
BC006991-1|AAH06991.1| 268|Homo sapiens ribonuclease P/MRP 30kD... 35 0.23
AL590622-3|CAH72457.1| 212|Homo sapiens ribonuclease P (30kD) (... 35 0.23
AL590622-2|CAC70100.1| 268|Homo sapiens ribonuclease P (30kD) (... 35 0.23
AL590622-1|CAH72456.1| 254|Homo sapiens ribonuclease P (30kD) (... 35 0.23
AK075260-1|BAC11504.1| 122|Homo sapiens protein ( Homo sapiens ... 31 2.2
>BC038842-1|AAH38842.1| 164|Homo sapiens C1orf91 protein protein.
Length = 164
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>BC004885-1|AAH04885.1| 140|Homo sapiens chromosome 1 open reading
frame 91 protein.
Length = 140
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>AY358586-1|AAQ88949.1| 180|Homo sapiens AASL548 protein.
Length = 180
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>AL049795-9|CAI22060.1| 180|Homo sapiens chromosome 1 open reading
frame 91 protein.
Length = 180
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>AL049795-8|CAI22059.1| 140|Homo sapiens chromosome 1 open reading
frame 91 protein.
Length = 140
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>AL049795-7|CAM12880.1| 164|Homo sapiens chromosome 1 open reading
frame 91 protein.
Length = 164
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>AF258548-1|AAG23751.1| 164|Homo sapiens PP1065 protein.
Length = 164
Score = 60.9 bits (141), Expect = 3e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +1
Query: 43 LMITGVLWGCTNPFIRQGTRGLRDIKSDTLVGQVRAEIWFLLSNWKYVVPWLVNQAGSLV 222
L++ LWG T P +++ + GL+ + T Q+ E+ L N +Y++P+L+NQ GSL+
Sbjct: 11 LVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL 70
Query: 223 YLAAVQRAPLSVAVPVASGV 282
Y + L++AVP+ + +
Sbjct: 71 YYLTLASTDLTLAVPICNSL 90
>U77665-1|AAC51143.1| 268|Homo sapiens RNaseP protein P30 protein.
Length = 268
Score = 34.7 bits (76), Expect = 0.23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 137 PTSVSDLMSRKPLVP*RMKGFVQPQRTPVIISNPSSCNILSHTS 6
P +VS+L + P+V + + R +I+S+PS CN+L TS
Sbjct: 51 PVAVSELFTTLPIVQGKSRPIKILTRLTIIVSDPSHCNVLRATS 94
>BC006991-1|AAH06991.1| 268|Homo sapiens ribonuclease P/MRP 30kDa
subunit protein.
Length = 268
Score = 34.7 bits (76), Expect = 0.23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 137 PTSVSDLMSRKPLVP*RMKGFVQPQRTPVIISNPSSCNILSHTS 6
P +VS+L + P+V + + R +I+S+PS CN+L TS
Sbjct: 51 PVAVSELFTTLPIVQGKSRPIKILTRLTIIVSDPSHCNVLRATS 94
>AL590622-3|CAH72457.1| 212|Homo sapiens ribonuclease P (30kD)
(RPP30) protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 137 PTSVSDLMSRKPLVP*RMKGFVQPQRTPVIISNPSSCNILSHTS 6
P +VS+L + P+V + + R +I+S+PS CN+L TS
Sbjct: 5 PVAVSELFTTLPIVQGKSRPIKILTRLTIIVSDPSHCNVLRATS 48
>AL590622-2|CAC70100.1| 268|Homo sapiens ribonuclease P (30kD)
(RPP30) protein.
Length = 268
Score = 34.7 bits (76), Expect = 0.23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 137 PTSVSDLMSRKPLVP*RMKGFVQPQRTPVIISNPSSCNILSHTS 6
P +VS+L + P+V + + R +I+S+PS CN+L TS
Sbjct: 51 PVAVSELFTTLPIVQGKSRPIKILTRLTIIVSDPSHCNVLRATS 94
>AL590622-1|CAH72456.1| 254|Homo sapiens ribonuclease P (30kD)
(RPP30) protein.
Length = 254
Score = 34.7 bits (76), Expect = 0.23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -3
Query: 137 PTSVSDLMSRKPLVP*RMKGFVQPQRTPVIISNPSSCNILSHTS 6
P +VS+L + P+V + + R +I+S+PS CN+L TS
Sbjct: 73 PVAVSELFTTLPIVQGKSRPIKILTRLTIIVSDPSHCNVLRATS 116
>AK075260-1|BAC11504.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ90779 fis, clone THYRO1001205. ).
Length = 122
Score = 31.5 bits (68), Expect = 2.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 187 VPWLVNQAGSLVYLAAVQRAPLSVAVPVASGV 282
+P+L+NQ GSL+Y + L++AVP+ + +
Sbjct: 1 MPFLLNQRGSLLYYLTLASTDLTLAVPICNSL 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,120,911
Number of Sequences: 237096
Number of extensions: 1147155
Number of successful extensions: 6410
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6410
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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