Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23c22
(587 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089546-1|AAL90284.1| 419|Drosophila melanogaster LD22634p pro... 138 5e-33
AE014296-1308|AAF50524.1| 419|Drosophila melanogaster CG12262-P... 138 5e-33
AY113386-1|AAM29391.1| 415|Drosophila melanogaster RE05302p pro... 41 0.001
AE014297-1462|AAF54761.1| 415|Drosophila melanogaster CG4860-PA... 41 0.001
AE014296-3076|AAF49216.1| 414|Drosophila melanogaster CG3902-PA... 41 0.001
AY119269-1|AAM51129.1| 405|Drosophila melanogaster SD24551p pro... 40 0.002
AE014297-2721|AAF55709.1| 405|Drosophila melanogaster CG4703-PA... 40 0.002
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 30 2.7
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 30 2.7
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 30 2.7
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 30 2.7
BT015279-1|AAT94508.1| 1238|Drosophila melanogaster LD12816p pro... 29 3.5
AE013599-2609|AAF57755.1| 1238|Drosophila melanogaster CG5098-PA... 29 3.5
BT029048-1|ABJ16981.1| 422|Drosophila melanogaster IP05422p pro... 29 6.2
BT028785-1|ABI34166.1| 422|Drosophila melanogaster IP07891p pro... 29 6.2
AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p pro... 29 6.2
AE014297-115|AAF52116.1| 231|Drosophila melanogaster CG14652-PA... 29 6.2
AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,... 29 6.2
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,... 29 6.2
AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,... 29 6.2
U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein. 28 8.2
DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge spli... 28 8.2
AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge prot... 28 8.2
AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA... 28 8.2
>AY089546-1|AAL90284.1| 419|Drosophila melanogaster LD22634p
protein.
Length = 419
Score = 138 bits (334), Expect = 5e-33
Identities = 65/137 (47%), Positives = 86/137 (62%)
Frame = +2
Query: 176 LAQIVRATRPIYRKLXXXXXXXXXXKPIPTTGFCFELTDEQKALQELARKFTKDEIIPVA 355
+A + + P R+L + G F LT++Q LQELARKFT++EIIPVA
Sbjct: 1 MAFLNKLAAPALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVA 60
Query: 356 GQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADELAFXXXXXXXXX 535
QYDK+GEYPWP++KKAWE+GLMN HIP GG+ + VF C+ A+ELA+
Sbjct: 61 AQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGL-DLDVFTTCLSAEELAYGCTGIMTAL 119
Query: 536 XXXSLGQTPIIIAGNKE 586
LGQTP+I++GNKE
Sbjct: 120 EASGLGQTPVILSGNKE 136
>AE014296-1308|AAF50524.1| 419|Drosophila melanogaster CG12262-PA
protein.
Length = 419
Score = 138 bits (334), Expect = 5e-33
Identities = 65/137 (47%), Positives = 86/137 (62%)
Frame = +2
Query: 176 LAQIVRATRPIYRKLXXXXXXXXXXKPIPTTGFCFELTDEQKALQELARKFTKDEIIPVA 355
+A + + P R+L + G F LT++Q LQELARKFT++EIIPVA
Sbjct: 1 MAFLNKLAAPALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELARKFTREEIIPVA 60
Query: 356 GQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADELAFXXXXXXXXX 535
QYDK+GEYPWP++KKAWE+GLMN HIP GG+ + VF C+ A+ELA+
Sbjct: 61 AQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGL-DLDVFTTCLSAEELAYGCTGIMTAL 119
Query: 536 XXXSLGQTPIIIAGNKE 586
LGQTP+I++GNKE
Sbjct: 120 EASGLGQTPVILSGNKE 136
>AY113386-1|AAM29391.1| 415|Drosophila melanogaster RE05302p
protein.
Length = 415
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 284 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 460
L++ + LQ+ R+F E+ P A +D+ YP V++ E+GLM+ + E GG G
Sbjct: 37 LSETHQILQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSG 95
>AE014297-1462|AAF54761.1| 415|Drosophila melanogaster CG4860-PA
protein.
Length = 415
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 284 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 460
L++ + LQ+ R+F E+ P A +D+ YP V++ E+GLM+ + E GG G
Sbjct: 37 LSETHQILQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSG 95
>AE014296-3076|AAF49216.1| 414|Drosophila melanogaster CG3902-PA
protein.
Length = 414
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 284 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG- 460
LTD++K ++E K +++I P+ + D ++ VVK +E GLM I GG G
Sbjct: 37 LTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGC 96
Query: 461 NFGVFEECIVADELA 505
NF +V +EL+
Sbjct: 97 NF--MTNIVVVEELS 109
>AY119269-1|AAM51129.1| 405|Drosophila melanogaster SD24551p
protein.
Length = 405
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 284 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 460
L++ + LQ+ R F +E+ A ++D+ YP +++ E+G+M IPE GG G
Sbjct: 27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTG 85
>AE014297-2721|AAF55709.1| 405|Drosophila melanogaster CG4703-PA
protein.
Length = 405
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 284 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 460
L++ + LQ+ R F +E+ A ++D+ YP +++ E+G+M IPE GG G
Sbjct: 27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTG 85
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 501 SSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 349
S S++ +S +P + P P S P PTS + T YSP +Y P T
Sbjct: 1674 SPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S ++ ++ TP + P P S P P S A+ TG YS
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS-PQYSPASPAYSQTGVKYS 1757
Query: 375 P 373
P
Sbjct: 1758 P 1758
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 501 SSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 349
S S++ +S +P + P P S P PTS + T YSP +Y P T
Sbjct: 193 SPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 245
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S ++ ++ TP + P P S P P S A+ TG YS
Sbjct: 218 PSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS-PQYSPASPAYSQTGVKYS 276
Query: 375 P 373
P
Sbjct: 277 P 277
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 501 SSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 349
S S++ +S +P + P P S P PTS + T YSP +Y P T
Sbjct: 1214 SPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1266
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S ++ ++ TP + P P S P P S A+ TG YS
Sbjct: 1239 PSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS-PQYSPASPAYSQTGVKYS 1297
Query: 375 P 373
P
Sbjct: 1298 P 1298
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 501 SSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 349
S S++ +S +P + P P S P PTS + T YSP +Y P T
Sbjct: 1672 SPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S ++ ++ TP + P P S P P S A+ TG YS
Sbjct: 1697 PSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS-PQYSPASPAYSQTGVKYS 1755
Query: 375 P 373
P
Sbjct: 1756 P 1756
>BT015279-1|AAT94508.1| 1238|Drosophila melanogaster LD12816p
protein.
Length = 1238
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -3
Query: 576 PAIMMGVCPKDVPP-IAVVMPVHPNASSSATMHS---SKTPKFPMPPQCSGMCPF 424
PA+ + C ++ P + V P HP+ ++A + + +++PK P S CPF
Sbjct: 605 PAVSVHECDEEEEPAVNKVSPAHPDPPTTAAVAAPPATESPKKSSPAANSESCPF 659
>AE013599-2609|AAF57755.1| 1238|Drosophila melanogaster CG5098-PA
protein.
Length = 1238
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -3
Query: 576 PAIMMGVCPKDVPP-IAVVMPVHPNASSSATMHS---SKTPKFPMPPQCSGMCPF 424
PA+ + C ++ P + V P HP+ ++A + + +++PK P S CPF
Sbjct: 605 PAVSVHECDEEEEPAVNKVSPAHPDPPTTAAVAAPPATESPKKSSPAANSESCPF 659
>BT029048-1|ABJ16981.1| 422|Drosophila melanogaster IP05422p
protein.
Length = 422
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 452 PRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQE 345
PRN E R Q+ KP++Q+ I+PPQ+
Sbjct: 113 PRNAREAGRHKRQMQKPAIQQQPLQQQQQRINPPQQ 148
>BT028785-1|ABI34166.1| 422|Drosophila melanogaster IP07891p
protein.
Length = 422
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 452 PRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQE 345
PRN E R Q+ KP++Q+ I+PPQ+
Sbjct: 113 PRNAREAGRHKRQMQKPAIQQQPLQQQQQRINPPQQ 148
>AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p
protein.
Length = 1508
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2
Query: 296 QKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGG 454
Q L +RK G+Y TGE K WE+ NG + EHC G
Sbjct: 70 QAYLVNTSRKAFTSVAFSRCGRYVATGECGINPAIKVWELETPNGSL-EHCSG 121
>AE014297-115|AAF52116.1| 231|Drosophila melanogaster CG14652-PA
protein.
Length = 231
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 452 PRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQE 345
PRN E R Q+ KP++Q+ I+PPQ+
Sbjct: 113 PRNAREAGRHKRQMQKPAIQQQPLQQQQQRINPPQQ 148
>AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,
isoform B protein.
Length = 1504
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2
Query: 296 QKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGG 454
Q L +RK G+Y TGE K WE+ NG + EHC G
Sbjct: 66 QAYLVNTSRKAFTSVAFSRCGRYVATGECGINPAIKVWELETPNGSL-EHCSG 117
>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
isoform C protein.
Length = 2347
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2
Query: 296 QKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGG 454
Q L +RK G+Y TGE K WE+ NG + EHC G
Sbjct: 66 QAYLVNTSRKAFTSVAFSRCGRYVATGECGINPAIKVWELETPNGSL-EHCSG 117
>AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,
isoform A protein.
Length = 1508
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2
Query: 296 QKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGG 454
Q L +RK G+Y TGE K WE+ NG + EHC G
Sbjct: 70 QAYLVNTSRKAFTSVAFSRCGRYVATGECGINPAIKVWELETPNGSL-EHCSG 121
>U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein.
Length = 829
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P HP + H P +P PP +G P TS + TG+G+S
Sbjct: 124 PYHPPHPHAPHHHHHHHPPYPYPP--AGPHPPAMVTSSSTSPTGNGWS 169
>DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge splice
variant protein.
Length = 705
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P HP + H P +P PP +G P TS + TG+G+S
Sbjct: 124 PYHPPHPHAPHHHHHHHPPYPYPP--AGPHPPAMVTSSSTSPTGNGWS 169
>AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge
protein.
Length = 826
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P HP + H P +P PP +G P TS + TG+G+S
Sbjct: 124 PYHPPHPHAPHHHHHHHPPYPYPP--AGPHPPAMVTSSSTSPTGNGWS 169
>AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA
protein.
Length = 826
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P HP + H P +P PP +G P TS + TG+G+S
Sbjct: 124 PYHPPHPHAPHHHHHHHPPYPYPP--AGPHPPAMVTSSSTSPTGNGWS 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,421,850
Number of Sequences: 53049
Number of extensions: 544756
Number of successful extensions: 1462
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -