Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23c22
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 85 5e-17
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 82 3e-16
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 50 2e-06
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 40 0.001
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 40 0.001
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 37 0.009
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 33 0.15
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 33 0.15
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 31 0.80
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 31 0.80
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 29 1.9
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 28 5.7
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 5.7
U23179-2|AAK68207.1| 345|Caenorhabditis elegans Serpentine rece... 28 5.7
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 27 7.5
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 27 9.9
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 27 9.9
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/108 (39%), Positives = 62/108 (57%)
Frame = +2
Query: 263 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 442
+TG F+LT +Q + RKF DE+IPVAG+YDKT EYPW ++KKA G + IPE
Sbjct: 21 STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80
Query: 443 HCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKE 586
GG+G + CI+++E+A+ L TP+I+ N +
Sbjct: 81 AYGGLG-VDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDD 127
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/103 (36%), Positives = 63/103 (61%)
Frame = +2
Query: 278 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 457
F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A +GLMN IPE GG
Sbjct: 29 FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88
Query: 458 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKE 586
G E ++ + L++ SL P+ I+GN+E
Sbjct: 89 G-MTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEE 130
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 81.8 bits (193), Expect = 3e-16
Identities = 39/103 (37%), Positives = 60/103 (58%)
Frame = +2
Query: 278 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 457
FEL+D QK +Q A KF+KD ++P A ++DK+GE+PW +VK+A +G MN IPE GG
Sbjct: 23 FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82
Query: 458 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKE 586
G + ++ + L++ SL PI ++G +E
Sbjct: 83 G-LSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEE 124
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +2
Query: 284 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 463
LT+ + + RKF+KD + P+ + DK + V + +E GLM H+PE GG G+
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 464 FGVFEECIVADELA 505
F IV +ELA
Sbjct: 108 -SFFNAMIVIEELA 120
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +2
Query: 281 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 460
+L++E+ ++ R+F + I P+ + D + V+ +E GLM IPE GG G
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 461 NFGVFEECIVADELA 505
+ F+ +V +ELA
Sbjct: 99 S-SFFDAVLVIEELA 112
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 433
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 434 IPEHCGGIGNFGVFEECIVADELA 505
P GG G F I +EL+
Sbjct: 91 APAEYGGSG-MNYFSHVIAMEELS 113
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 433
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 434 IPEHCGGIGNFGVFEECIVADELA 505
P GG G F I +EL+
Sbjct: 91 APAEYGGSG-MNYFSHVIAMEELS 113
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 311 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 460
E A +F K E+ P +DK GE P V++KA E+G + GG G
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSG 85
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S S+ +S +P + P P+ S P PTS + T YS
Sbjct: 1638 PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYS 1697
Query: 375 P 373
P
Sbjct: 1698 P 1698
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S S+ +S +P++ P P S P PTS + T YS
Sbjct: 1645 PSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1704
Query: 375 P 373
P
Sbjct: 1705 P 1705
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 561 GVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHG 382
GV P ++ P + S S + S + P+ P S P PTS ++ T
Sbjct: 1573 GVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1632
Query: 381 YSPVL-SY*PAT 349
YSP SY P +
Sbjct: 1633 YSPTSPSYSPTS 1644
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 349
P P+ S ++ +S +P + P P S P PTS ++ + YSP SY P++
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 519 PVHPNASSS--ATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PA 352
P P A S + +S +P + P P S P PTS ++ T YSP SY P+
Sbjct: 1598 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1657
Query: 351 T 349
+
Sbjct: 1658 S 1658
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 373
P P P P S ++ + S P P+ S P PTS ++ T YSP
Sbjct: 1687 PTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1746
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S +S +PK+ P P S P PTS + T YS
Sbjct: 1694 PTYSPTSPTYSPTSPSYESGGG-YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1752
Query: 375 P 373
P
Sbjct: 1753 P 1753
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 373
P+ P P P + S+ ++ +P+ PQ S P PTS ++ + YSP
Sbjct: 1742 PQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1801
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 373
P P S S+ +S +P + P PQ S P P+S + + Y+P
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1767
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S S+ +S +P + P P+ S P PTS + T YS
Sbjct: 1645 PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYS 1704
Query: 375 P 373
P
Sbjct: 1705 P 1705
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S S+ +S +P++ P P S P PTS + T YS
Sbjct: 1652 PSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1711
Query: 375 P 373
P
Sbjct: 1712 P 1712
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 561 GVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHG 382
GV P ++ P + S S + S + P+ P S P PTS ++ T
Sbjct: 1580 GVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 381 YSPVL-SY*PAT 349
YSP SY P +
Sbjct: 1640 YSPTSPSYSPTS 1651
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 349
P P+ S ++ +S +P + P P S P PTS ++ + YSP SY P++
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1679
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 519 PVHPNASSS--ATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PA 352
P P A S + +S +P + P P S P PTS ++ T YSP SY P+
Sbjct: 1605 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1664
Query: 351 T 349
+
Sbjct: 1665 S 1665
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 373
P P P P S ++ + S P P+ S P PTS ++ T YSP
Sbjct: 1694 PTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1753
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 376
P P P P+ S +S +PK+ P P S P PTS + T YS
Sbjct: 1701 PTYSPTSPTYSPTSPSYESGGG-YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1759
Query: 375 P 373
P
Sbjct: 1760 P 1760
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 552 PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 373
P+ P P P + S+ ++ +P+ PQ S P PTS ++ + YSP
Sbjct: 1749 PQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1808
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 519 PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 373
P P S S+ +S +P + P PQ S P P+S + + Y+P
Sbjct: 1725 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1774
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 302 ALQELARKFTKDEIIPVAGQYDKTGEYPWP-VVKKAWEVGLMNGHIPEHCGGIG 460
A+Q K K++I P Q++K+G YP V K ++G+ + P GG G
Sbjct: 31 AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTG 84
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1548 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1583
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1570 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1605
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1361 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1396
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1668 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1703
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1548 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1583
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1570 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1605
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1361 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1396
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1668 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1703
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1379 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1414
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 549 KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
+++PP A+V P+ P SSS + S FP PP S
Sbjct: 1339 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1374
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 365 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADELA 505
D+T E V+ +E GLM +PE GG G F+ +V +E++
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPG-ATFFDAALVIEEIS 47
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 537 PIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
P+ V P H N + + + +S + P+PP+ S
Sbjct: 736 PVQVSAPTHSNVAPTTSSQASADARNPLPPKTS 768
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 537 PIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 439
P+ V P H N + + + +S + P+PP+ S
Sbjct: 843 PVQVSAPTHSNVAPTTSSQASADARNPLPPKTS 875
>U23179-2|AAK68207.1| 345|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 5 protein.
Length = 345
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 487 DALFEDAKIP-YAPAMFWNVSVH*ANFPSLLYNGPRVLPRLIILTRHRN 344
D F+ + P Y A FW +SV PSLLY +L R+++L H N
Sbjct: 10 DLAFQISYHPIYRLAQFWTLSVSLLAVPSLLY---FLLKRVLLLPFHGN 55
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 564 MGVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPM 454
MGV P D+PP + MP P SSSA + PM
Sbjct: 47 MGVPPADMPPF-MGMPPMPPTSSSAMPFGMSSDHQPM 82
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 546 DVPPIAVVMPVHPNASSSATMHSSKTPKFPMP 451
D PP P P ASS+A H P P P
Sbjct: 586 DPPPPPYAPPSPPRASSAAAAHQQPPPLPPKP 617
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 246 AEAVVAVVDNFL*IGRVARTICANGFILN 160
A A + V D FL G VAR +C +GF ++
Sbjct: 414 ANAKIEVPDRFL-FGDVARVVCNSGFTID 441
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,964,593
Number of Sequences: 27780
Number of extensions: 270662
Number of successful extensions: 848
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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