Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23c19
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 261 NRCRSPWTGSLNIRPQRRRLR 323
           N C  P T   NIR  R+RLR
Sbjct: 271 NDCAKPLTQIRNIRGPRKRLR 291


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 370 GGRALGEHGQSGFKTFLK 317
           GG A+ +H  +GF T ++
Sbjct: 245 GGEAISKHEYTGFGTVIE 262


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 370 GGRALGEHGQSGFKTFLK 317
           GG A+ +H  +GF T ++
Sbjct: 246 GGEAISKHEYTGFGTVIE 263


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 370 GGRALGEHGQSGFKTFLK 317
           GG A+ +H  +GF T ++
Sbjct: 246 GGEAISKHEYTGFGTVIE 263


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 366 AAPWANTVSPDLR 328
           A PW   V P+LR
Sbjct: 99  AIPWLQNVEPNLR 111


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 412 KWIVARHQSRPYAHRKGCGICNPG 483
           ++ V     +   H  GC +C+PG
Sbjct: 206 EYAVGHWMQKATEHVIGCVLCSPG 229


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 412 KWIVARHQSRPYAHRKGCGICNPG 483
           ++ V     +   H  GC +C+PG
Sbjct: 520 EYAVGHWMQKATEHVIGCVLCSPG 543


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 412 KWIVARHQSRPYAHRKGCGICNPG 483
           ++ V     +   H  GC +C+PG
Sbjct: 753 EYAVGHWMQKATEHVIGCVLCSPG 776


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 412 KWIVARHQSRPYAHRKGCGICNPG 483
           ++ V     +   H  GC +C+PG
Sbjct: 753 EYAVGHWMQKATEHVIGCVLCSPG 776


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,272
Number of Sequences: 336
Number of extensions: 2821
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)