Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23c19
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p pro...   128   4e-30
AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA...   128   4e-30
AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB...    38   0.013
M23094-1|AAA28565.1|  355|Drosophila melanogaster G protein alph...    28   7.7  
AY051670-1|AAK93094.1|  355|Drosophila melanogaster LD22201p pro...    28   7.7  
AE014296-1173|AAF50626.1|  355|Drosophila melanogaster CG10060-P...    28   7.7  

>AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p
           protein.
          Length = 477

 Score =  128 bits (310), Expect = 4e-30
 Identities = 70/137 (51%), Positives = 89/137 (64%)
 Frame = +2

Query: 161 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 340
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAVA-CVKSG 61

Query: 341 LTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVSLFM 520
            TVFA GAAATPV LLNAM + GKS +L  + V HMHTE    Y  PE KD FRS S FM
Sbjct: 62  DTVFAGGAAATPVALLNAMAKHGKSNNLECVTVCHMHTEGPGEYAKPEYKDHFRSNSFFM 121

Query: 521 AANVRKSVAEGRSDAIP 571
            ANVRK+VA+GR D +P
Sbjct: 122 GANVRKAVADGRGDNVP 138


>AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA,
           isoform A protein.
          Length = 477

 Score =  128 bits (310), Expect = 4e-30
 Identities = 70/137 (51%), Positives = 89/137 (64%)
 Frame = +2

Query: 161 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 340
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAVA-CVKSG 61

Query: 341 LTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVSLFM 520
            TVFA GAAATPV LLNAM + GKS +L  + V HMHTE    Y  PE KD FRS S FM
Sbjct: 62  DTVFAGGAAATPVALLNAMAKHGKSNNLECVTVCHMHTEGPGEYAKPEYKDHFRSNSFFM 121

Query: 521 AANVRKSVAEGRSDAIP 571
            ANVRK+VA+GR D +P
Sbjct: 122 GANVRKAVADGRGDNVP 138


>AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB,
           isoform B protein.
          Length = 104

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +2

Query: 161 ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 340
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61


>M23094-1|AAA28565.1|  355|Drosophila melanogaster G protein alpha
           subunit protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +2

Query: 308 KEAFEKCLKSGLTVFAQGA-AATPVPLLN-AMTEVGKSGSLRDIKVVHMHTEKDAAYVTP 481
           KEA E+       + A+G  AA+ V LL     E GKS  ++ +K++H     D  Y   
Sbjct: 11  KEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTIVKQMKIIH-----DTGYSQE 65

Query: 482 ECKDIFRSV 508
           EC++  R V
Sbjct: 66  ECEEYRRVV 74


>AY051670-1|AAK93094.1|  355|Drosophila melanogaster LD22201p
           protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +2

Query: 308 KEAFEKCLKSGLTVFAQGA-AATPVPLLN-AMTEVGKSGSLRDIKVVHMHTEKDAAYVTP 481
           KEA E+       + A+G  AA+ V LL     E GKS  ++ +K++H     D  Y   
Sbjct: 11  KEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTIVKQMKIIH-----DTGYSQE 65

Query: 482 ECKDIFRSV 508
           EC++  R V
Sbjct: 66  ECEEYRRVV 74


>AE014296-1173|AAF50626.1|  355|Drosophila melanogaster CG10060-PA
           protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +2

Query: 308 KEAFEKCLKSGLTVFAQGA-AATPVPLLN-AMTEVGKSGSLRDIKVVHMHTEKDAAYVTP 481
           KEA E+       + A+G  AA+ V LL     E GKS  ++ +K++H     D  Y   
Sbjct: 11  KEAIERSKNIDRALRAEGERAASEVKLLLLGAGESGKSTIVKQMKIIH-----DTGYSQE 65

Query: 482 ECKDIFRSV 508
           EC++  R V
Sbjct: 66  ECEEYRRVV 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,880,247
Number of Sequences: 53049
Number of extensions: 542265
Number of successful extensions: 1377
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)