Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23c09
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011432-1|AAR99090.1|  537|Drosophila melanogaster RH67089p pro...   220   1e-57
AE014298-819|AAF46101.1|  537|Drosophila melanogaster CG3011-PA ...   220   1e-57
BT015309-1|AAT94537.1|  880|Drosophila melanogaster AT07233p pro...    29   3.7  
AY089511-1|AAL90249.1|  560|Drosophila melanogaster GH21034p pro...    29   3.7  
AE013599-494|AAN16139.1|  529|Drosophila melanogaster CG30497-PC...    29   3.7  
AE013599-493|AAF59198.3|  560|Drosophila melanogaster CG30497-PB...    29   3.7  
AE013599-492|AAF59197.3|  877|Drosophila melanogaster CG30497-PA...    29   3.7  
BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p pro...    29   4.9  
BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p pro...    29   4.9  
AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-P...    29   4.9  

>BT011432-1|AAR99090.1|  537|Drosophila melanogaster RH67089p
           protein.
          Length = 537

 Score =  220 bits (537), Expect = 1e-57
 Identities = 101/136 (74%), Positives = 112/136 (82%)
 Frame = +3

Query: 195 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 374
           KLL + L + DPEL ++I KEK+RQR GLEMIASENFTSV VL+ LSSCL NKYSEG P 
Sbjct: 75  KLLQTPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSEGYPG 134

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIM 554
           +RYYGGNEYID IE+LAQ R  E + L  E+WGVNVQPYSGSPAN AVYTG+  PH RIM
Sbjct: 135 KRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAVYTGVCRPHDRIM 194

Query: 555 GLDLPDGGHLTHGFFT 602
           GLDLPDGGHLTHGFFT
Sbjct: 195 GLDLPDGGHLTHGFFT 210


>AE014298-819|AAF46101.1|  537|Drosophila melanogaster CG3011-PA
           protein.
          Length = 537

 Score =  220 bits (537), Expect = 1e-57
 Identities = 101/136 (74%), Positives = 112/136 (82%)
 Frame = +3

Query: 195 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPN 374
           KLL + L + DPEL ++I KEK+RQR GLEMIASENFTSV VL+ LSSCL NKYSEG P 
Sbjct: 75  KLLQTPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSEGYPG 134

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIM 554
           +RYYGGNEYID IE+LAQ R  E + L  E+WGVNVQPYSGSPAN AVYTG+  PH RIM
Sbjct: 135 KRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAVYTGVCRPHDRIM 194

Query: 555 GLDLPDGGHLTHGFFT 602
           GLDLPDGGHLTHGFFT
Sbjct: 195 GLDLPDGGHLTHGFFT 210


>BT015309-1|AAT94537.1|  880|Drosophila melanogaster AT07233p
           protein.
          Length = 880

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQP 488
           +RY     +ID  +I  Q   LEAY L++  WGV+ +P
Sbjct: 661 ERYMCSRFFIDFPDINTQTTKLEAY-LRNHFWGVDEEP 697


>AY089511-1|AAL90249.1|  560|Drosophila melanogaster GH21034p
           protein.
          Length = 560

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQP 488
           +RY     +ID  +I  Q   LEAY L++  WGV+ +P
Sbjct: 341 ERYMCSRFFIDFPDINTQTTKLEAY-LRNHFWGVDEEP 377


>AE013599-494|AAN16139.1|  529|Drosophila melanogaster CG30497-PC,
           isoform C protein.
          Length = 529

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQP 488
           +RY     +ID  +I  Q   LEAY L++  WGV+ +P
Sbjct: 310 ERYMCSRFFIDFPDINTQTTKLEAY-LRNHFWGVDEEP 346


>AE013599-493|AAF59198.3|  560|Drosophila melanogaster CG30497-PB,
           isoform B protein.
          Length = 560

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQP 488
           +RY     +ID  +I  Q   LEAY L++  WGV+ +P
Sbjct: 341 ERYMCSRFFIDFPDINTQTTKLEAY-LRNHFWGVDEEP 377


>AE013599-492|AAF59197.3|  877|Drosophila melanogaster CG30497-PA,
           isoform A protein.
          Length = 877

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 375 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQP 488
           +RY     +ID  +I  Q   LEAY L++  WGV+ +P
Sbjct: 658 ERYMCSRFFIDFPDINTQTTKLEAY-LRNHFWGVDEEP 694


>BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p protein.
          Length = 1193

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +3

Query: 96   LSSAIHTTNNIYGKRNSKTFAAKRYISSTKMSAKLLNSNLWEADPEL-FDIIVKEKDRQR 272
            +S A+H+ +  Y    S    AKR++++     +LL+  LW   P++  +++V    +QR
Sbjct: 833  VSGALHSLHQTYSAFGSTVLLAKRWLAT-----QLLDDGLW---PDMATELLVAHLFQQR 884

Query: 273  AGLEMIASENFTSVPVLQCLS 335
               + IA+     +  LQ LS
Sbjct: 885  YAPQSIAAPQTGFIRFLQLLS 905


>BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p protein.
          Length = 1193

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +3

Query: 96   LSSAIHTTNNIYGKRNSKTFAAKRYISSTKMSAKLLNSNLWEADPEL-FDIIVKEKDRQR 272
            +S A+H+ +  Y    S    AKR++++     +LL+  LW   P++  +++V    +QR
Sbjct: 833  VSGALHSLHQTYSAFGSTVLLAKRWLAT-----QLLDDGLW---PDMATELLVAHLFQQR 884

Query: 273  AGLEMIASENFTSVPVLQCLS 335
               + IA+     +  LQ LS
Sbjct: 885  YAPQSIAAPQTGFIRFLQLLS 905


>AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-PA
            protein.
          Length = 1193

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +3

Query: 96   LSSAIHTTNNIYGKRNSKTFAAKRYISSTKMSAKLLNSNLWEADPEL-FDIIVKEKDRQR 272
            +S A+H+ +  Y    S    AKR++++     +LL+  LW   P++  +++V    +QR
Sbjct: 833  VSGALHSLHQTYSAFGSTVLLAKRWLAT-----QLLDDGLW---PDMATELLVAHLFQQR 884

Query: 273  AGLEMIASENFTSVPVLQCLS 335
               + IA+     +  LQ LS
Sbjct: 885  YAPQSIAAPQTGFIRFLQLLS 905


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,865,734
Number of Sequences: 53049
Number of extensions: 633802
Number of successful extensions: 1435
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)