Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23c07
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 39 0.003
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 30 1.6
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 30 1.6
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 30 1.6
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 27 8.4
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 27 8.4
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical
protein C50H2.1 protein.
Length = 929
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 358 QDGYSGCICRASKQNGV--VVCFGNYECRMFPKIKVKCEFLRVRTTVITNIRKGHLDSLY 531
+DG GC C+ +K+ G C G ++ + +L + T I+ I D
Sbjct: 49 EDG-EGCTCKQTKRYGQPECCCMGLIVSQLPTNLTADVGYLYLHNTSISVITPNFFDKFP 107
Query: 532 FLKVLEIEANHQLRHIEAGVFKNLTSLQQLSI 627
++ LEI+ + L HI+ L+ L++LS+
Sbjct: 108 SIRELEIDNSAHLEHIDGSSLSVLSKLRKLSV 139
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 358 QDGYSGCICRASKQNGV--VVCFGNYECRMFPKIKVKCEFLRVRTTVITNIRKGHLDSLY 531
+DG GC C+ +K+ G C G ++ + +L + T I+ I D
Sbjct: 49 EDG-EGCTCKQTKRYGQPECCCMGLIVSQLPTNLTADVGYLYLHNTSISVITPNFFDKFP 107
Query: 532 FLKVLEIEANHQLRHIEAGVFKNLTSLQQLSI 627
++ LEI+ + L HI+ L+ L++LS+
Sbjct: 108 SIRELEIDNSAHLEHIDGSSLSVLSKLRKLSV 139
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 466 EFLRVRTTVITNIRKGHLDSLYFLKVLEIEANHQLRHIEAGVFKNLTSLQQLSI 627
+ + V+ I I + +SL L VL + N+ L IE G+F + +LQQLSI
Sbjct: 320 QLISVQNNNIVQISRNSFESLDKLVVLLV-GNNSLAKIERGMFDGMKNLQQLSI 372
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 472 LRVRTTVITNIRKGHLDSLYFLKVLEIEANHQLRHIEAGVFKNLTSLQQLSIS 630
L++ I I SL FL+ L + N ++RH+ VF+N L L +S
Sbjct: 73 LQLMDNQIVTIHNQSFSSLVFLQKLRLSRN-RIRHLPDNVFQNNLKLTHLDLS 124
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 271 GDLIEVYKELSHTILYPQEKSDDLPVELGQD 363
G L+EV K+L +ILYP +++DD LG D
Sbjct: 536 GALVEVRKQLEWSILYPIKRADDF-AALGID 565
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 472 LRVRTTVITNIRKGHLDSLYFLKVLEIEANHQLRHIEAGVFKNLTSLQQLSIS 630
L++ I I SL FL+ L + N ++RH+ VF+N L L +S
Sbjct: 73 LQLMDNQIVTIHNQSFSSLVFLQKLRLSRN-RIRHLPDNVFQNNLKLTHLDLS 124
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 271 GDLIEVYKELSHTILYPQEKSDDLPVELGQD 363
G L+EV K+L +ILYP +++DD LG D
Sbjct: 536 GALVEVRKQLEWSILYPIKRADDF-AALGID 565
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 420 RKLRMSNVS*DQSEMRISQSQNNSHNEYKKR 512
RK+R+SN D E R S NSH ++R
Sbjct: 10 RKIRISNSDDDSRETRFSIQPRNSHKTKEER 40
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 442 FPKIKVKCEFLRVRTTVITNIRKGHLDSLYF----LKVLEIEANHQLRHIEAGVFKNLTS 609
FP I + LR +IRK + + Y L++L + N+QL I +L
Sbjct: 548 FPSILFQMPSLRSLNLADNSIRKIEIPTYYISSTSLEILNLR-NNQLECIAIQFLSSLPQ 606
Query: 610 LQQLSIS 630
LQQL +S
Sbjct: 607 LQQLDVS 613
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 442 FPKIKVKCEFLRVRTTVITNIRKGHLDSLYF----LKVLEIEANHQLRHIEAGVFKNLTS 609
FP I + LR +IRK + + Y L++L + N+QL I +L
Sbjct: 546 FPSILFQMPSLRSLNLADNSIRKIEIPTYYISSTSLEILNLR-NNQLECIAIQFLSSLPQ 604
Query: 610 LQQLSIS 630
LQQL +S
Sbjct: 605 LQQLDVS 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,874,620
Number of Sequences: 27780
Number of extensions: 285673
Number of successful extensions: 676
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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