Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23b15
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0512 - 22852009-22852140,22852686-22852820,22853739-228537...    28   7.5  
06_01_0936 - 7220333-7220508,7221208-7221327,7221898-7223089           27   9.9  

>01_05_0512 -
           22852009-22852140,22852686-22852820,22853739-22853787,
           22854043-22854128,22854211-22854291,22854394-22854496,
           22854577-22854684,22854799-22854919,22855532-22855712
          Length = 331

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 207 KLIGHSITCLCDLFSSYADRRKVVVVVHGQP 299
           KL G +   +CDL S  ADRR V + ++  P
Sbjct: 199 KLGGATAEIMCDLLSFEADRRAVNITINRYP 229


>06_01_0936 - 7220333-7220508,7221208-7221327,7221898-7223089
          Length = 495

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 81  ANFGVGCDRSCMCEVFGQVPCS 146
           A  G GCDR C C V     CS
Sbjct: 354 ARGGAGCDRCCACHVEESSSCS 375


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,584,436
Number of Sequences: 37544
Number of extensions: 295584
Number of successful extensions: 502
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)