Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23b15
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003590-1|AAH03590.1|  173|Homo sapiens mitochondrial ribosomal...    61   4e-09
AK024702-1|BAB14968.1|  173|Homo sapiens protein ( Homo sapiens ...    61   4e-09
AK024433-1|BAB15723.1|  192|Homo sapiens FLJ00023 protein protein.     61   4e-09

>BC003590-1|AAH03590.1|  173|Homo sapiens mitochondrial ribosomal
           protein S25 protein.
          Length = 173

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 3   HLLHTVGKSXXXXXXXXXXXXXXDNPANFGVG--CDRSCMCEVFGQVPCSGVVPLPKFMR 176
           H+   +GK+               +PANFG    C R C+CEV GQVPC  +VPLPK MR
Sbjct: 101 HIRKILGKNEETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMR 160

Query: 177 GKYK 188
           GKYK
Sbjct: 161 GKYK 164


>AK024702-1|BAB14968.1|  173|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21049 fis, clone CAS00384. ).
          Length = 173

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 3   HLLHTVGKSXXXXXXXXXXXXXXDNPANFGVG--CDRSCMCEVFGQVPCSGVVPLPKFMR 176
           H+   +GK+               +PANFG    C R C+CEV GQVPC  +VPLPK MR
Sbjct: 101 HIRKILGKNEETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMR 160

Query: 177 GKYK 188
           GKYK
Sbjct: 161 GKYK 164


>AK024433-1|BAB15723.1|  192|Homo sapiens FLJ00023 protein protein.
          Length = 192

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 3   HLLHTVGKSXXXXXXXXXXXXXXDNPANFGVG--CDRSCMCEVFGQVPCSGVVPLPKFMR 176
           H+   +GK+               +PANFG    C R C+CEV GQVPC  +VPLPK MR
Sbjct: 120 HIRKILGKNEETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMR 179

Query: 177 GKYK 188
           GKYK
Sbjct: 180 GKYK 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,885,767
Number of Sequences: 237096
Number of extensions: 1716857
Number of successful extensions: 2244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2242
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)