Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23b11
         (342 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1239|AAF58692.3|  527|Drosophila melanogaster CG13223-P...    28   2.8  
AY051948-1|AAK93372.1|  382|Drosophila melanogaster LD42063p pro...    27   4.8  
AE014298-1163|AAF46360.3|  382|Drosophila melanogaster CG1636-PA...    27   4.8  

>AE013599-1239|AAF58692.3|  527|Drosophila melanogaster CG13223-PA
           protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 37  FGRVKCVRLRFRLAFNVLSVI-FEYRSNRSLRFLIVELFIHTFYYYFGITIV 189
           FG   C+ L   + F++LSV+   ++  R+  FL+V  +I    ++ G+ I+
Sbjct: 469 FGETVCIFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYI----FFVGVLIL 516


>AY051948-1|AAK93372.1|  382|Drosophila melanogaster LD42063p
           protein.
          Length = 382

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +1

Query: 64  RFRLAFNVLSVIFEYRSNRSLRFLIVELFIHTFYYY 171
           R+ L ++  ++IF YRS+++ +F    +FI TFY +
Sbjct: 120 RYSLFYSSENLIF-YRSHQAEKFQFYSIFIITFYLH 154


>AE014298-1163|AAF46360.3|  382|Drosophila melanogaster CG1636-PA
           protein.
          Length = 382

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +1

Query: 64  RFRLAFNVLSVIFEYRSNRSLRFLIVELFIHTFYYY 171
           R+ L ++  ++IF YRS+++ +F    +FI TFY +
Sbjct: 120 RYSLFYSSENLIF-YRSHQAEKFQFYSIFIITFYLH 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,535,260
Number of Sequences: 53049
Number of extensions: 215474
Number of successful extensions: 429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)