Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23a17
(527 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 115 2e-26
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 48 5e-06
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 46 2e-05
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 42 4e-04
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 41 5e-04
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 40 0.001
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.001
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.001
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 40 0.001
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 40 0.001
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 40 0.001
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 38 0.006
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 37 0.010
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 36 0.018
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 36 0.018
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 36 0.018
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 33 0.096
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 33 0.13
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 31 0.39
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 31 0.39
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 31 0.51
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 31 0.51
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 31 0.51
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 30 0.89
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 30 0.89
AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical... 30 0.89
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.2
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 30 1.2
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 30 1.2
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 29 1.6
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 29 2.1
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical pr... 28 3.6
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 28 3.6
U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 28 4.8
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 27 6.3
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 27 6.3
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 27 6.3
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 27 6.3
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 27 6.3
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 27 6.3
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 27 8.3
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 27 8.3
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 27 8.3
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 27 8.3
AL117203-8|CAB55110.1| 376|Caenorhabditis elegans Hypothetical ... 27 8.3
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 27 8.3
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 27 8.3
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 27 8.3
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 115 bits (277), Expect = 2e-26
Identities = 52/112 (46%), Positives = 79/112 (70%)
Frame = +3
Query: 192 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 371
VRI+L+G+ G GKTSL++SL+ +E+ + VP + + + IPADVTPE V T+I+D+ I E+
Sbjct: 10 VRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEED 69
Query: 372 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
+ EI +A+VIC+V+SV + T++ I T WLP +R + E + PVILV
Sbjct: 70 ENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILV 121
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +3
Query: 345 IDICIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVIL 524
+D+ I E+ + EI +A+VIC+V+SV + T++ I T WLP +R + E + PVIL
Sbjct: 1 MDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVIL 60
Query: 525 V 527
V
Sbjct: 61 V 61
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
R ++ +++G+ VGKT +++S T+ F ++VP + + + V + D
Sbjct: 6 RQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQ 65
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + FSV + + +A+ W+P +R +CP+ PVILV
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPD---APVILV 117
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
R ++ +++G+ VGKT +++S T+ F ++VP + + + V + D
Sbjct: 6 RQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQ 65
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + FSV + + +A+ W+P +R +CP+ PVILV
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPD---APVILV 117
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 371
+++++G+ GKT L++ ++F + +VP E +V +QV + D E
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 372 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
VI + FS+D ++L I W P VR CP P+ILV
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP---NVPIILV 115
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 371
+++++G+ GKT L++ ++F + +VP E +V +QV + D E
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 372 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
VI + FS+D ++L I W P VR CP P+ILV
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP---NVPIILV 115
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 368
++L++G+ GVGK+SL+L F+E ++ + I D+ ++V I D E+
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQER 71
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNC 494
+ H + +V+ V E+ + WL + +NC
Sbjct: 72 FRTITSTYYRGTHGVVVVYDVTNGESFGNVKR-WLQEIENNC 112
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 41.1 bits (92), Expect = 5e-04
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Frame = +3
Query: 189 TVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 368
T++IL++GE GVGK+SL+L V + F P +A I + VT + N + + I +
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDVFD---PEQAATIGVDFRVTSMAIDGNRVKLAIWDT 67
Query: 369 SLEQVAEEIERAH------VICIVFSVDRQETLNKIATYWLPFVRDNCPED 503
+ ++ + ++ VIC V+ V + + K+ +W+ V C D
Sbjct: 68 AGQERFRTLTPSYYRGAQGVIC-VYDVTSRSSFEKL-NHWMQEVDTYCTND 116
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 368
++LL+G+ GVGK+ L+L + +TE ++ + I ++ + + I D E+
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
+ AH I +V+ + QET N + WL + E+ K ++
Sbjct: 73 FRTITSSYYRGAHGIIVVYDITDQETFNNV-KQWLQEIDRYACENVNKLLV 122
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 37.5 bits (83), Expect = 0.006
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 368
+I+L+G PGVGK++L+ EF P E T V + V I D E+
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPED 503
+ A +V+ + + +T + WL +RD+ ED
Sbjct: 70 FRCGASSYYRGALGALLVYDISKHKTYESV-EQWLKVLRDHANED 113
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICI 359
RT RI++ G+ VGK+S ++ ++ +FT +P + +V V + D
Sbjct: 460 RTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAG 519
Query: 360 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
E+ RA +V+ V +++ ++ W+ ++++ P+ILV
Sbjct: 520 QERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRD-WIETIKESTERSI--PIILV 572
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L+LS T F E++ + + V + ++ D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
+ + + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 362
+ ++ +++G+ VGKT L+LS T F E++ + + V + ++ D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
+ + + V + F+++ + + W P V +CP P+ILV
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILV 113
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 35.9 bits (79), Expect = 0.018
Identities = 27/104 (25%), Positives = 46/104 (44%)
Frame = +3
Query: 177 TVPRTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 356
T +T +I ++G+ G GK+SLI L+T E+ A+EI + + D+
Sbjct: 233 TSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAF---ADEIQDYENTVSICIGGVECDLV 289
Query: 357 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRD 488
E + H +V+S+D + + K A L +RD
Sbjct: 290 FFESDMSDPCWLTNEIHAFLVVYSIDSKSSW-KQAMVALEMIRD 332
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 33.5 bits (73), Expect = 0.096
Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 371
+++++G GVGK++L L + +EF E+ P KA+ + E+ +I+D ++
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTA-GQED 77
Query: 372 LEQVAEEIERA--HVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILV 527
+ + R+ IC VFS+ E+ + +R D P++LV
Sbjct: 78 YSAIRDNYYRSGEGFIC-VFSILDMESFEATNEFREQILRVK-NSDSSVPIVLV 129
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI-TIPADVTPEQVPTNIIDICIPEQS 371
R+++LG VGKT++I + EF+ E++ + + +P +I+D
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDTNFNFPD 78
Query: 372 LEQVAEEIERAHVICIVFSVDRQETLNKIATYW 470
+ +++ I A +VFSVD + +++ W
Sbjct: 79 MRRLS--IASASAFLLVFSVDDVTSFKEMSDIW 109
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 368
+++LLGE VGK+SL+L V +F E+ A +T + + I D E+
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWL 473
A +V+ + QE+ K A W+
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQK-AKNWV 114
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPP 284
R +RILLLG GKT+++ L +E+ +HV P
Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSED-VQHVTP 47
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEH 275
++L++G+PGVGKTS+I V F+ +
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSN 39
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEH 275
++L++G+PGVGKTS+I V F+ +
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSN 39
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 31.1 bits (67), Expect = 0.51
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 192 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPE 365
+++++LG+ GVGKTSL+ V F+ A+ +T ++ V I D +
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTA-GQ 68
Query: 366 QSLEQVAEEIERAHVICIV-FSVDRQETLNKIATYWLPFVRDNCPED 503
+ + + R C++ F V + + ++ F+ P D
Sbjct: 69 ERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRD 115
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 31.1 bits (67), Expect = 0.51
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPA-DVTPEQVPTNIIDICIPEQ 368
++LL+G+ GVGKT ++ + F T + + I ++ +++ I D E+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
A I +V+ + ++ + IA WL + ++ ED K ++
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHASEDVVKMIL 120
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 31.1 bits (67), Expect = 0.51
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPA-DVTPEQVPTNIIDICIPEQ 368
++LL+G+ GVGKT ++ + F T + + I ++ +++ I D E+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
A I +V+ + ++ + IA WL + ++ ED K ++
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHASEDVVKMIL 120
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 30.3 bits (65), Expect = 0.89
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 442 SCL-STENTMHITCALSISSATCSKDCSGIQISIILVGTCSGVTSAGIVISSAFGGTCSV 266
SC+ ST N+ I C S S CS + QI++I G T+ G SSA G TC +
Sbjct: 161 SCMQSTLNSAFICCRSSSSQRICSNN----QIALITNGALEMCTTPGTQCSSA-GYTCQL 215
Query: 265 N 263
+
Sbjct: 216 S 216
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 30.3 bits (65), Expect = 0.89
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEH 275
++L++G+ GVGK+SL+L F+E+
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSEN 38
>AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical
protein F37B4.14 protein.
Length = 143
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 413 YYMCPFYLFSN-LFQRLFRNTNINNIGWNLFWRYISRYSYFFS 288
+Y+ P LFSN ++ + + NN+GWN+ ++FFS
Sbjct: 30 HYINPILLFSNNSYEHHHLSRSSNNVGWNILAILKLHITFFFS 72
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 174 ETVPRTVRILLLGE---PGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNI 344
E +P V+ILL E P V K S L ++ + P+ ++ + V PE VP +
Sbjct: 64 EPIPELVQILLAAEPNKPSVPKRSNRKKLTYKQPPRNSTPQVPKVAVTLPV-PEPVPEPV 122
Query: 345 IDICIPEQSLEQVAEEI 395
+ +PE + E ++E +
Sbjct: 123 PE-PVPESTPEPISEPL 138
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 29.9 bits (64), Expect = 1.2
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPAD-------VTPEQVPTNI 344
RT +++++G VGKT L F EH E TI D + E + +
Sbjct: 99 RTFKVIIVGNAAVGKTCLSFRFCCGRFPEHT-----EATIGVDFRERSCVIENELLRVQL 153
Query: 345 IDICIPEQSLEQ-VAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
D E+ + VA + + V+ V +E+ N +A + + D P I
Sbjct: 154 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRI 213
Query: 522 LV 527
L+
Sbjct: 214 LI 215
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTE 272
++LL+G+ GVGK+ L+L + +TE
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTE 38
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 425 KYYAYYMCPFYLFSNLFQRLFRNTNINNIGWNLFWRYISRYSYFFSFW 282
+Y+ ++ F FSNL + F+NT + F+ S S FF+ W
Sbjct: 63 QYFKFFNEKFQFFSNLSNKKFKNTGKKPV----FFSNFSNKSIFFAVW 106
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 29.5 bits (63), Expect = 1.6
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKA----EEITIPADVTPEQVPTNIIDICIP 362
+++L+G+ GVGK++L+ EF H+ K+ E T V + V I D
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEF--HLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 363 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPED 503
E+ + A +V+ + + T + WL +RD+ ++
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVER-WLKELRDHADQN 116
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFT 269
+I+LLGE VGK+SL+L V +F+
Sbjct: 14 KIVLLGEGCVGKSSLVLRFVENKFS 38
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 281
R +RIL+LG G GKT+++ L E +P
Sbjct: 15 REMRILILGLDGAGKTTILYRLQVGEVVTTIP 46
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 162 KMVYETVPRTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 281
KM+ E +L+ GEPG GKT++ ++ +++E E P
Sbjct: 57 KMIQEGKIAGRALLVTGEPGAGKTAIAIA-ISKELGEDTP 95
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEF 266
+TV+++++GE G GKT+L+ + F
Sbjct: 5 KTVKVVVVGESGAGKTALLTCFLDNTF 31
>Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical
protein F41D3.4 protein.
Length = 669
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -3
Query: 255 SLTIK*VMFYQLLARLEEVYVRFEVQFHKPFCSFILETSYVYYLFS*AVV 106
SL+++ V FY L+ + + + + H P+ + I SY+++ FS A V
Sbjct: 142 SLSVE-VQFYVLVPSMYLIGTKLPAKLHNPYYTIIGLASYLFFHFSPAPV 190
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 201 LLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP 308
L++GE GVGK+SL+L V + P +A I +P
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVD---PERAVSIGVP 33
>U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical
protein ZK546.5 protein.
Length = 646
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 273 HVPPKAEEITIPADVTPEQVPTNIIDICIPEQSLEQVAEE 392
H+P + EE+ + + P +P+ IP++ + AE+
Sbjct: 455 HIPTQHEEVVVESSEDPNDIPST-SQAMIPDEDANEAAEQ 493
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 368
+++L+G+ GVGK++L+ EF E T V + V I D E+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPED 503
+ A +V+ + + T + WL +RD+ ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVER-WLKELRDHADQN 116
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITI 305
R+ + G PGVGK+S I +L E TE+ K +TI
Sbjct: 25 RVGISGSPGVGKSSFIEAL-GAELTENRGKKVAVLTI 60
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITI 305
R+ + G PGVGK+S I +L E TE+ K +TI
Sbjct: 126 RVGISGSPGVGKSSFIEAL-GAELTENRGKKVAVLTI 161
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 180 VPRTVRILLLGEPGVGKTSLI 242
+PR +L+ G+ G+GKTSL+
Sbjct: 404 LPRNKTLLITGDSGIGKTSLM 424
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 180 VPRTVRILLLGEPGVGKTSLI 242
+PR +L+ G+ G+GKTSL+
Sbjct: 432 LPRNKTLLITGDSGIGKTSLM 452
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 180 VPRTVRILLLGEPGVGKTSLI 242
+PR +L+ G+ G+GKTSL+
Sbjct: 404 LPRNKTLLITGDSGIGKTSLM 424
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP 308
R LLL G G +S+ + L+T EH A I +P
Sbjct: 6 RFLLLSFLGTGVSSIRIGLITSHHLEHSVRTAVNIIVP 43
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = -2
Query: 475 GNQ*VAILFKVSCLSTENTMHITCALSISSATCSKDCSGIQISIILVGTCSGVTSAG 305
GNQ + I+ S + +N+ C+ + ++ TC + C +G+C+ + G
Sbjct: 161 GNQPIVIVIPSSSRNCQNSCQNQCSSACTTMTCRQTCQN-----TCLGSCNSCSGGG 212
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 368
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
A I +V+ + + + I W+ + ++ D + +I
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVERMII 119
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEFTEHVP---PKAEEITI 305
+++ LG GKT+L+ L + +HVP P +E++++
Sbjct: 23 KLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSL 62
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 281
R VRIL++G GKT+++ L E +P
Sbjct: 16 RQVRILMVGLDAAGKTTILYKLKLGEIVTTIP 47
>AL117203-8|CAB55110.1| 376|Caenorhabditis elegans Hypothetical
protein Y48C3A.11 protein.
Length = 376
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 462 WLFYLKSLVYPLKILCIL 409
WLFYL + V P ILCI+
Sbjct: 208 WLFYLVAKVVPSIILCIM 225
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 368
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
A I +V+ + + + I W+ + ++ D + +I
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVERMII 119
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 186 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 281
R VRIL++G GKT+++ L E +P
Sbjct: 16 RQVRILMVGLDAAGKTTILYKLKLGEIVTTIP 47
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +3
Query: 195 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 368
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 369 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 521
A I +V+ + + + I W+ + ++ D + +I
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVERMII 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,697,633
Number of Sequences: 27780
Number of extensions: 211878
Number of successful extensions: 945
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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