Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23a14
(570 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 53 3e-08
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 44 2e-05
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 40 3e-04
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 39 4e-04
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 37 0.002
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 36 0.003
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 36 0.004
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 33 0.029
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 32 0.051
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 31 0.090
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 29 0.48
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 29 0.63
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 0.84
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 28 1.1
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 27 1.5
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 1.5
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 1.9
SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomy... 27 1.9
SPAC27E2.05 |cdc1|mis1|DNA polymerase delta small subunit Cdc1|S... 27 2.6
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.6
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.5
SPAC1B3.20 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 4.5
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 26 4.5
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 26 4.5
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 25 5.9
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 25 5.9
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 25 7.8
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 53.2 bits (122), Expect = 3e-08
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +1
Query: 238 ISYEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFL 417
+S Q I S + I A G + D VGR+ LL +IG +++A S +
Sbjct: 117 LSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMM 176
Query: 418 CIGRFITGFTIGM-STVSYIYVAEITTPEKRGVLSALGPGLVSTGIFIVYSL 570
+GRFI G+ IG+ S + +Y+ E+ RG L + ++ G I YSL
Sbjct: 177 VVGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAYSL 228
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 43.6 bits (98), Expect = 2e-05
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 268 SLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGRFITGFT 447
SLG + +G ++ G + D GR+ ++ + ++G +V + + +GRF+ G+
Sbjct: 137 SLGAL---LGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWG 193
Query: 448 IGM-STVSYIYVAEITTPEKRGVLSALGPGLVSTGIFIVYSL 570
+G+ S + +Y++EI + RG L + L++ G I Y +
Sbjct: 194 VGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGI 235
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 39.9 bits (89), Expect = 3e-04
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Frame = +1
Query: 217 YSLE-YPSISYEQSSWIASLGVISNPIGALLGGMMV---DAVGRRLLLQSIVLPNLIGWL 384
YSL+ Y + ++ S +A++ ++ N + A++ MV D GR L + ++G+L
Sbjct: 87 YSLQRYATSNFSAHSNLATINLVGNILLAVVRAPMVKAADVFGRSESLSLALGMTVLGYL 146
Query: 385 VIAFSETYVFLCIGR--FITGFTIGMSTVSYIYVAEITTPEKRGVLSAL 525
+AFS + +I G T G+ +S + +A+ ++ RG+LSA+
Sbjct: 147 SLAFSRNIQMFTVAYILYICGQT-GLGLLSQLIIADTSSLLNRGILSAI 194
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 39.1 bits (87), Expect = 4e-04
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Frame = +1
Query: 193 FSAVLLPQYSLEYPSISYEQS--SWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLP 366
F + +Y+ S SY S I + + + G LL + D +G+RL +
Sbjct: 4 FQSRFADRYNQITNSYSYSSSRQGLITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTV 63
Query: 367 NLIGWLV-IAFSETYVFLCIGRFITGFTIG-MSTVSYIYVAEITTPEKRGVLSALGPGLV 540
LIG ++ + ++V + + + TG +IG +S ++ Y +E+ RG + +
Sbjct: 64 YLIGIIIQVTTVPSWVQILVAKIWTGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFI 123
Query: 541 STGIFI 558
+ GIFI
Sbjct: 124 TLGIFI 129
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 36.7 bits (81), Expect = 0.002
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +1
Query: 235 SISYEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLV-IAFSETYV 411
S+S + + + + + G ++ + D G+RL + +IG +V + ++V
Sbjct: 56 SLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWV 115
Query: 412 FLCIGRFITGFTIG-MSTVSYIYVAEITTPEKRGVLSALGPGLVSTGIFI 558
+ + + TG IG +S ++ Y +E P RG + V+ GIFI
Sbjct: 116 QIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFI 165
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 36.3 bits (80), Expect = 0.003
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +1
Query: 235 SISYEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLV-IAFSETYV 411
S S + I + + + G +L ++D +G+R+ + + LIG ++ + ++V
Sbjct: 52 SYSSARQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQVTAVPSWV 111
Query: 412 FLCIGRFITGFTIG-MSTVSYIYVAEITTPEKRGVLSALGPGLVSTGIFI 558
+ + + TG IG +S ++ + +E+ RG + V+ GIFI
Sbjct: 112 QIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGIFI 161
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +1
Query: 235 SISYEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLV-IAFSETYV 411
S S + I + + + G L ++D +G+R + + LIG ++ + ++V
Sbjct: 52 SYSSARQGLITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSWV 111
Query: 412 FLCIGRFITGFTIG-MSTVSYIYVAEITTPEKRGVLSALGPGLVSTGIFI 558
+ + + TG +IG +S ++ + +E+ + RG + V+ GIFI
Sbjct: 112 QIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGTIVTTYQLAVTGGIFI 161
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 33.1 bits (72), Expect = 0.029
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 SSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGRF 432
SSWI S V+++ G+ + +GR+++L + ++G + S+ ++L + R
Sbjct: 133 SSWIGSAYVLASNAVLPAVGVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRA 192
Query: 433 ITGF-TIGMSTVSYIYVAEITTPEKRGVLSAL 525
I G G+ ++ I +++IT R + S +
Sbjct: 193 IQGLGGGGIISLVNIIISDITPLRTRPMYSGI 224
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 32.3 bits (70), Expect = 0.051
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 SWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGRFI 435
SWI + ++ G+M + VGR+++L + ++ L G + ++ ++L + R +
Sbjct: 128 SWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAV 187
Query: 436 TGF-TIGMSTVSYIYVAEITTPEKR 507
G G++++ I +A+IT + R
Sbjct: 188 QGIGGGGITSLVTIVIADITPLQTR 212
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 31.5 bits (68), Expect = 0.090
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 SWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGRFI 435
SWI + ++ G+M + VGR+++L + ++ L G + ++ ++L + R +
Sbjct: 128 SWIGTAYSLAETSILPFCGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAV 187
Query: 436 TGFTIG--MSTVSYIYVAEITTPEKR 507
G G MS V+ I +A+IT + R
Sbjct: 188 QGIGGGGIMSLVT-IVIADITPLQTR 212
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 0.48
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +1
Query: 250 QSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGR 429
+ + I S+ ++ I ++ + + GRR+LLQ + ++ + + T + I R
Sbjct: 83 EKALILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQMYIFR 142
Query: 430 FITGFTIGMSTVSYI---YVAEITTPEKRG 510
F+ GF G +T + ++++ TP++RG
Sbjct: 143 FLAGF--GSATPMGLGSGTISDLFTPDERG 170
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 28.7 bits (61), Expect = 0.63
Identities = 25/86 (29%), Positives = 37/86 (43%)
Frame = +1
Query: 307 GGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGRFITGFTIGMSTVSYIYVAE 486
G M R+ L+ S P I L F + YVFL +GR G T T ++V +
Sbjct: 356 GADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGR--VGSTSENITQKVVHVED 413
Query: 487 ITTPEKRGVLSALGPGLVSTGIFIVY 564
EKR L + L G+ +++
Sbjct: 414 ---SEKRSYLLDILHTLPPEGLTLIF 436
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 28.3 bits (60), Expect = 0.84
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +1
Query: 244 YEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCI 423
+ Q SW A+ +IS L G D GR+ L + IG + S + L
Sbjct: 123 FSQVSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCFLCGTSRSLWQLVA 182
Query: 424 GRFITGF-TIGMSTVSYIYVAEITTPEKRGVLSAL 525
R I G GM++ I +++I ++RG +
Sbjct: 183 ARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGI 217
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 295 GALLGGMMVDAVG-RRLLLQSIVLPNLIGWLVIAFSETYVFLCIG 426
GALLGG+ D +G + L+ +VL ++ G+ + F V G
Sbjct: 354 GALLGGVFSDLLGPKYCLITGLVLQSIFGFFMSGFYNQLVHKIAG 398
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.5 bits (58), Expect = 1.5
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +1
Query: 316 MVDAVGRRLL-LQSIVLPNLI------GWLVIAFSETYVFLCIGRFITGFTIGMSTVSYI 474
+V+ +GR+ + LQ + + L+ W I+ + I +F + F G + +++
Sbjct: 402 LVEKLGRKWIQLQGLFITGLMFAILAGSWDTISTGGRFACFVIAQFFSNF--GPNATTFL 459
Query: 475 YVAEITTPEKRGVLSALGPGLVSTGIFI 558
Y AE+ RG L L G +
Sbjct: 460 YPAEVFPARVRGTAHGLSAALGKCGAIL 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 8 LRECLQHRLLVLSSPHLTRTVHSHLKWRNAH 100
LR L+H LL S L + + S LKWRN H
Sbjct: 365 LRCALRHELL---SAGLQKAIDSLLKWRNRH 392
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 148 LAAQSINISVGFCQGFSAVLLPQYSLEYPSISYE 249
L Q ++I CQ SA++LP + P + YE
Sbjct: 609 LQVQLLHIISSLCQSSSALILPFLNHNLPDVMYE 642
>SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 505
Score = 27.1 bits (57), Expect = 1.9
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 196 SAVLLPQYSLEYPSISYEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLI 375
S LLP+ + S+S Q +A G+I + +G + ++ LL+ VL +
Sbjct: 4 SVSLLPEGESLHRSLSASQIQMLAFGGIIGTGLFLGIGSSLAESGPASLLISFSVLGVSV 63
Query: 376 GWLVIAFSETYVFLCI-GRFIT 438
++A E V++ + G F T
Sbjct: 64 YCTMLALGEMSVYMPVAGSFCT 85
>SPAC27E2.05 |cdc1|mis1|DNA polymerase delta small subunit
Cdc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 FSAVLLPQYSLEYPSISYEQSSWI-ASLGVISNPIGALLGGMMV 321
+S+ +LPQ L +P++ + W+ +SL ++NP LG V
Sbjct: 297 YSSTILPQQPL-HPALLTKSKVWLGSSLQTVTNPTWLSLGNHFV 339
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 2.6
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 253 SVRTIWTDTQASTGAAEPPRSPDRNPPIC**IARQGPPTPVTI*CASSLLFVSVPP 86
+V+T T T+A+ AA+ P++ PP+ A TPV A++ V VPP
Sbjct: 345 TVQTTTTTTEAA--AAQYPQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPP 398
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 459 NGIVHLRG*DHDSRKERGSQ 518
+G H+ +HD RKE GSQ
Sbjct: 2377 DGFPHIYSRNHDKRKENGSQ 2396
>SPAC1B3.20 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 78
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 353 DCNSSRRPTASTIMPPSSAPMGLEITPRLAIH 258
D ++ R T S MPP P G + PR H
Sbjct: 23 DLRNALRETESHGMPPLRGPAGFPVNPRPFSH 54
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 460 TVSYIYVAEITTPEKRGVLSALGPGL 537
T Y+ + E+ TPE L+ALG GL
Sbjct: 313 TAGYVGLTELYTPEAVKRLNALGDGL 338
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 25.8 bits (54), Expect = 4.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 217 YSLEYPSISY-EQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSI 357
Y +E +S ++SS+ S +I + L MVD +GRR LL+S+
Sbjct: 341 YYIERQYVSLRDKSSYDESCFIIEQLLYIGLSQDMVDEIGRRKLLKSL 388
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.4 bits (53), Expect = 5.9
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +1
Query: 316 MVDAVGRRLL-LQSIVLPNLI------GWLVIAFSETYVFLCIGRFITGFTIGMSTVSYI 474
+V+ +GR+ + LQ V+ L+ W I+ + I + + F G ++ ++I
Sbjct: 414 LVEILGRKWIQLQGFVITGLMFAILAGRWNEISTGGRFACFVIAQLFSNF--GPNSTTFI 471
Query: 475 YVAEITTPEKRGVLSALGPGLVSTGIFI 558
Y AE+ RG + L G +
Sbjct: 472 YPAEVFPARVRGTAHGISAALGKCGAIL 499
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 25.4 bits (53), Expect = 5.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 369 PHRLAGHSLLRDLRLPLHRTIHH 437
P+R HS+ D + L T+HH
Sbjct: 29 PYRAPNHSIFSDRPVQLQLTVHH 51
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 25.0 bits (52), Expect = 7.8
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +1
Query: 316 MVDAVGRRLL-LQSIVLPNLI------GWLVIAFSETYVFLCIGRFITGFTIGMSTVSYI 474
+V+ +GR+ + LQ V+ L+ W I+ + I + + F G ++ ++I
Sbjct: 413 LVEILGRKWIQLQGFVITGLMFAILAGRWNEISTGGRFACFVIAQLFSNF--GPNSTTFI 470
Query: 475 YVAEITTPEKRGVLSALGPGLVSTGIFI 558
Y AE+ RG + L G +
Sbjct: 471 YPAEVFPARVRGTAHGVSAALGKCGAIL 498
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,290,389
Number of Sequences: 5004
Number of extensions: 44986
Number of successful extensions: 168
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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