Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23a14
(570 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 24 1.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 24 1.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.1
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 3.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 3.7
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 8.6
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 8.6
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 8.6
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 83 KWRNAHKQQGRSTSDRHRCWRP 148
K+R K++ R ++R RC P
Sbjct: 58 KYRETSKERSRDRTERERCKEP 79
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 366 EPHRLAGHSLLRDLRLPLHRTIHHRIHYRNVNGIVHL 476
E HR A HS + L R +HH I ++ +H+
Sbjct: 130 ELHRAACHSGSSLTKSRLMRCLHHDIENAHIRRTLHM 166
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +1
Query: 61 PHRS*PPEVAERSQTTRKKHIRSSPVLAALAAQSINISVGFCQGFSAVLLPQYSL 225
PH PP ++ +S ++ SP+ + + ++ G LLPQ+ L
Sbjct: 436 PHDDQPP-LSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCL 489
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 3.7
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 2 TLLRECLQHRLLVLSSPHLTRTVHSHLKWRNAHKQQGRSTSDRHRCWRP 148
T++R L V +SPH + K R A G S CW P
Sbjct: 339 TIVRNHLNSTCSVTNSPHQKKLRFHLAKERKASTTLGIIMSAFIVCWLP 387
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 311 PPSSAPMGLEITPRLAIHEL 252
PPS P + I+P IH++
Sbjct: 55 PPSQNPSQMMISPASGIHQM 74
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 218 YWGSRTAEKP*QKPTD 171
YWG+R +K +K +D
Sbjct: 329 YWGARAKKKSKKKESD 344
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 539 TRPGPKALRTPL 504
TRP KALR PL
Sbjct: 182 TRPTDKALRLPL 193
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 539 TRPGPKALRTPL 504
TRP KALR PL
Sbjct: 239 TRPTDKALRLPL 250
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,669
Number of Sequences: 438
Number of extensions: 3161
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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