Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23a13
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.0  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   5.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.3  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = -2

Query: 303 HHVRPGASRECPCARTLPPVRSARLCTHNDSVTQISNMSCTETEDHENSRDS 148
           HHV P +      A  L    +  LC H     + +N   T + D E  R S
Sbjct: 511 HHVAPPSGHHASSAPLLAATLAGGLCPHR----RRANSGSTSSGDDELHRAS 558


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 533 WAVFTXRTPCLHIFGQ*MV 589
           WA+     PCL +FG  +V
Sbjct: 189 WALILVIVPCLTLFGNVLV 207


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 185 HDIFEICVTES 217
           HD+ EIC TES
Sbjct: 27  HDVQEICKTES 37


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 228 KGEHCERGAE 257
           K EHCE+G E
Sbjct: 779 KSEHCEKGKE 788


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,041
Number of Sequences: 438
Number of extensions: 2981
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)