Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt23a05
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 62 2e-10
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 62 2e-10
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.9
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.9
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.9
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 27 7.7
U97001-6|AAB52257.2| 374|Caenorhabditis elegans Hypothetical pr... 27 7.7
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 62.5 bits (145), Expect = 2e-10
Identities = 52/168 (30%), Positives = 71/168 (42%), Gaps = 37/168 (22%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PAC- 298
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 299 -------------HCDYDLNQVCGSDNHTYDXXXXXXXXXX-TNPGLSILYSGLCA---- 424
C+ + VC ++ T+D T + + + G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 442
Query: 425 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDCPLK 541
D K +VDG K +CT E K VCGSDG TY+N+C L+
Sbjct: 443 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 490
Score = 55.2 bits (127), Expect = 3e-08
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 43/177 (24%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 283
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 454
Query: 284 ----GFPAC---HCDYDLNQVCGSDNHTY-DXXXXXXXXXXTNPGLSILYSGLC-ADEVK 436
G P C C + +VCGSD TY + + + Y+ C A ++K
Sbjct: 455 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 514
Query: 437 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCPLK--LCH 550
V G ++ C C E K VCG+DG+TY+++C +K CH
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACH 571
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 110 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 268
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 452 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 508
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 10/52 (19%)
Frame = +2
Query: 419 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCPLKL 544
C K V PS +P C C + VCGSDG TY+N C LK+
Sbjct: 845 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKM 896
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 461 PSCTCTREMKPVCGSDGITYNNDCPLKL--CHNQ 556
P+C + P+CGSDGI YNN C L C +Q
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQ 716
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 134 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 274
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 537 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 586
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 446 GPSKYPSCTC----TREMKPVCGSDGITYNNDCPLKL 544
G + P C C T VCG+DG TY N+C LKL
Sbjct: 310 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKL 346
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 137 PSCACYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRV 250
P+C N P+CG+DG YNN+C L+ + RD + V
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHV 721
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 62.5 bits (145), Expect = 2e-10
Identities = 52/168 (30%), Positives = 71/168 (42%), Gaps = 37/168 (22%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PAC- 298
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 299 -------------HCDYDLNQVCGSDNHTYDXXXXXXXXXX-TNPGLSILYSGLCA---- 424
C+ + VC ++ T+D T + + + G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 450
Query: 425 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDCPLK 541
D K +VDG K +CT E K VCGSDG TY+N+C L+
Sbjct: 451 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 498
Score = 55.2 bits (127), Expect = 3e-08
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 43/177 (24%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 283
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 462
Query: 284 ----GFPAC---HCDYDLNQVCGSDNHTY-DXXXXXXXXXXTNPGLSILYSGLC-ADEVK 436
G P C C + +VCGSD TY + + + Y+ C A ++K
Sbjct: 463 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 522
Query: 437 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCPLK--LCH 550
V G ++ C C E K VCG+DG+TY+++C +K CH
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACH 579
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 110 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 268
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 460 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 516
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Frame = +2
Query: 419 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCPLKL--CHNQ 556
C K V PS +P C C + VCGSDG TY+N C LK+ C +Q
Sbjct: 784 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACKHQ 841
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 134 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 274
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 545 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 594
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 446 GPSKYPSCTC----TREMKPVCGSDGITYNNDCPLKL 544
G + P C C T VCG+DG TY N+C LKL
Sbjct: 318 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKL 354
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/141 (31%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 134 PPSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE----GNVGFPACH 301
PP C C RPVCGTD TYNN C L C R + L Y G C + VG P C
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKECEKVGTPICD 75
Query: 302 CDYDLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTR 481
+ + +D H + L+ L+ G C+ + +CT T
Sbjct: 76 ---NFGETHINDCHFAQFQCIMKKSMGLS--LTKLHMGRCSSK-------DCNHNCTNT- 122
Query: 482 EMKPVCGSDGITYNNDCPLKL 544
E PVC ++G Y N C ++
Sbjct: 123 EFDPVCDTNGSVYRNLCVFQM 143
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Frame = +2
Query: 140 SCACYRNQRPVCGTDGKTYNNECLL--DCATRDDPGLRVRYQGPCSEGNVGFPACHCDYD 313
S C + P+CGT+G T+ N C L + + + V Y G C + N C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN-------CPSD 821
Query: 314 LNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKP 493
+ VC S T+ L D+ ++ + K + C +E P
Sbjct: 822 FSPVCDSKGSTHQNICHFGVKRCI--AERTFGDVLTIDKFEVCN-EVKECNNACPKEYSP 878
Query: 494 VCGSDGITYNNDCPL 538
VC S+G N+C L
Sbjct: 879 VCASNGQNIVNECEL 893
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 7/139 (5%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE---GNVGFPACHCDYDLN 319
C ++ P+C +D TY N C D L V ++G CSE PA + D +
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP-DES 648
Query: 320 QVCGSDNHTYDXXXXXXXXXXTNPG----LSILYSGLCADEVKIVDGPSKYPSCTCTREM 487
VC D T G L++ Y G+C V+ D T +
Sbjct: 649 FVCLEDQSTKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCD----------TEKP 698
Query: 488 KPVCGSDGITYNNDCPLKL 544
PVC G T+ +C L +
Sbjct: 699 DPVCTDSGATFLTECELNI 717
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 431 VKIVDGPSKYPSCTCTREMKPVCGSDGITYNNDCPLK 541
+ + G S P C C ++PVCG+D +TYNN C L+
Sbjct: 7 ILLFTGFSPPPDCDCPSVIRPVCGTDNVTYNNLCFLR 43
Score = 38.7 bits (86), Expect = 0.003
Identities = 40/130 (30%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = +2
Query: 167 PVCGTDGKTYNNECLLD---C--ATRDDPGLRVRYQGPCSEGNVGFPACHCDYDLNQVC- 328
PVC T+G T+ N CL+D C ++ ++V YQG C CD D VC
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ-------PCDEDKTPVCD 983
Query: 329 GSDNH--TYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCG 502
G+ H N LSI YSG C P C VC
Sbjct: 984 GTITHPNICRFRIAQCEAERVNKTLSIAYSGECC----------LLPKGEC-ESSGAVCD 1032
Query: 503 SDGITYNNDC 532
S+G T+ N C
Sbjct: 1033 SEGQTHMNHC 1042
Score = 35.5 bits (78), Expect = 0.029
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 2/112 (1%)
Frame = +2
Query: 137 PSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACH--CDY 310
P C + +PVC + G + N C + + E + AC C
Sbjct: 533 PKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTD 592
Query: 311 DLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPS 466
D + +C SD TY+ + L +L+ G C++ +D P P+
Sbjct: 593 DKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE---CLDSPCALPA 641
Score = 31.9 bits (69), Expect = 0.36
Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 12/160 (7%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNEC---LLDCATRDDPG--LRVRYQGPCSEGNVGFPACHCDYD 313
C ++ PVC T +T+ N C C G + + + G C C D
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 314 LNQVCGSDNHTYDXXXXXXXXXXT-----NPGLSILYSGLCADEVKIVDGPSKYPSCTCT 478
+C + N T+ + +++ C + + TC+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 479 REMKPVCGSDGITYNNDCPLKL--CHNQ*LXTRHRILRXL 592
R++KPVC T+ N C + C+ + L R LR L
Sbjct: 377 RDVKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYL 416
Score = 31.1 bits (67), Expect = 0.63
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 464 SCTCTREMKPVCGSDGITYNNDCPLK 541
S C P+CG++G+T+ N C L+
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQ 794
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +2
Query: 146 ACYRNQRPVCGTDGKT-------YNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACHC 304
+C + +PVC + G+T +N++C+ D + L + YQG C PA C
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCC------PA-GC 1124
Query: 305 DYDLNQVCGSDNHTY 349
+L+ +C + Y
Sbjct: 1125 TDELSVICDQHENIY 1139
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 146 ACYRNQRPVCGTDGKTYNNECLLD 217
AC + PVC ++G+ NEC LD
Sbjct: 871 ACPKEYSPVCASNGQNIVNECELD 894
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 41.5 bits (93), Expect = 4e-04
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 5/136 (3%)
Frame = +2
Query: 140 SCACYRNQRPVCGTDGK---TYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACHCDY 310
+C+C PVC +G TY+N+C+ CA + L + Y+G C A +C+
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCS------ARYCNM 77
Query: 311 DLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCT--CTRE 484
VC S+ Y + L + + +D + SCT C E
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEER-------QCIEFKLFKNHIS-MDSSQEKCSCTAPCPTE 128
Query: 485 MKPVCGSDGITYNNDC 532
PVC G T+ N C
Sbjct: 129 WNPVCDKKGQTHANFC 144
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 28.7 bits (61), Expect = 3.3
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Frame = +2
Query: 182 DGKTYNNECLLDCATRDDPGLRVRY---QG-PCSEGNVGFPACHCDYD-------LNQVC 328
DG C+ C G++V Y G C+ GN+ P C +N +C
Sbjct: 1006 DGSDAVGACIPSCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLC 1065
Query: 329 GSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSD 508
+ + GL + +G+C D + +G S TCT E+ +
Sbjct: 1066 PTGYTVQGNLCCSATCTDGSTGLPSV-NGVCIDGYSLTNGVCCPASVTCTDEIS-IGPCT 1123
Query: 509 GITYNNDCP 535
G +N CP
Sbjct: 1124 GTGFNGGCP 1132
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 28.7 bits (61), Expect = 3.3
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Frame = +2
Query: 182 DGKTYNNECLLDCATRDDPGLRVRY---QG-PCSEGNVGFPACHCDYD-------LNQVC 328
DG C+ C G++V Y G C+ GN+ P C +N +C
Sbjct: 348 DGSDAVGACIPSCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLC 407
Query: 329 GSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSD 508
+ + GL + +G+C D + +G S TCT E+ +
Sbjct: 408 PTGYTVQGNLCCSATCTDGSTGLPSV-NGVCIDGYSLTNGVCCPASVTCTDEIS-IGPCT 465
Query: 509 GITYNNDCP 535
G +N CP
Sbjct: 466 GTGFNGGCP 474
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 28.7 bits (61), Expect = 3.3
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 11/129 (8%)
Frame = +2
Query: 182 DGKTYNNECLLDCATRDDPGLRVRY---QG-PCSEGNVGFPACHCDYD-------LNQVC 328
DG C+ C G++V Y G C+ GN+ P C +N +C
Sbjct: 348 DGSDAVGACIPSCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLC 407
Query: 329 GSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSD 508
+ + GL + +G+C D + +G S TCT E+ +
Sbjct: 408 PTGYTVQGNLCCSATCTDGSTGLPSV-NGVCIDGYSLTNGVCCPASVTCTDEIS-IGPCT 465
Query: 509 GITYNNDCP 535
G +N CP
Sbjct: 466 GTGFNGGCP 474
>Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical
protein F53F8.4 protein.
Length = 253
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 131 YPPSCACYRNQRPVCG 178
Y PSCA Y RP CG
Sbjct: 32 YQPSCAAYSQPRPSCG 47
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 99 RCCT---CCRTCCCTRCCTCCRPCCCG 122
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 97 RCCT---CCRTCCCTRCCTCCRPCCCG 120
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 98 RCCT---CCRTCCCTRCCTCCRPCCCG 121
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 98 RCCT---CCRTCCCTRCCTCCRPCCCG 121
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 99 RCCT---CCRTCCCTRCCTCCRPCCCG 122
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = -1
Query: 201 LLYVFPSV-------PHTGRWFL*HAQLGGYASVAITCVAASNIPILKYIVN*YIFLSPS 43
LLY FP + H +W + ++ ++ ++C+ +N+ I +I +I+ SPS
Sbjct: 188 LLYHFPQIILPCIGKKHFKKWDQYYWEVESMSTNTLSCICKNNMGIFMHIQEHFIYKSPS 247
Query: 42 LF 37
F
Sbjct: 248 GF 249
>U97001-6|AAB52257.2| 374|Caenorhabditis elegans Hypothetical
protein K08B12.1 protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 399 LRPGFVAAAQFNRQALSYVWL 337
L P + AAQ+NRQA+ Y +L
Sbjct: 297 LNPAVLTAAQYNRQAMHYRYL 317
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 173 CGTDGKTYNNECLLD-C-ATRDDPGLRVRYQGPCSEGNVGFPACHCDYDLNQVC 328
CG GK N +C+L+ C D G R G C + F H D N +C
Sbjct: 96 CGKHGKCVNGQCILNRCQGVSCDEGSMCR-DGKCEKVLETFCIGHADCGPNMLC 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,111,244
Number of Sequences: 27780
Number of extensions: 285884
Number of successful extensions: 725
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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