Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22p14
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family ...    29   0.55 
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p...    29   0.55 
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p...    29   0.55 

>U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family
           protein 2, isoform c protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 135 GALWTDRXLNATXCSXXTHGXKYCNSRTCHNNG 233
           G L   R  N   C    H  + CN  TC N+G
Sbjct: 832 GTLVRQRTCNREPCDGSAHERRSCNVATCQNDG 864


>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
           protein 2, isoform a protein.
          Length = 1020

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 135 GALWTDRXLNATXCSXXTHGXKYCNSRTCHNNG 233
           G L   R  N   C    H  + CN  TC N+G
Sbjct: 832 GTLVRQRTCNREPCDGSAHERRSCNVATCQNDG 864


>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
           protease protein.
          Length = 1020

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 135 GALWTDRXLNATXCSXXTHGXKYCNSRTCHNNG 233
           G L   R  N   C    H  + CN  TC N+G
Sbjct: 832 GTLVRQRTCNREPCDGSAHERRSCNVATCQNDG 864


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,092,466
Number of Sequences: 27780
Number of extensions: 63011
Number of successful extensions: 110
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)